ggKbase home page

scnpilot_solids1_trim150_scaffold_160_curated_17

Organism: solids_Rhodanobacter_5

partial RP 37 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: 23249..23740

Top 3 Functional Annotations

Value Algorithm Source
GAF sensor protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W330_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 163.0
  • Bit_score: 327
  • Evalue 9.70e-87
GAF sensor protein {ECO:0000313|EMBL:EIL93871.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 163.0
  • Bit_score: 327
  • Evalue 1.40e-86
GAF domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 91.4
  • Coverage: 163.0
  • Bit_score: 302
  • Evalue 6.20e-80

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 492
ATGTTCGACCTGAAAGCCCAGACCTACGCCAGCAAGCGCGAGCACTACGCCGACCTGGTGCAGCAGGCGCGCGGCATCCTGGCCGGCGAGTGCGACCTGATCGCCAACGCGGCCAATTTCGGCGCACTGGTCTATCACAGCCTGGCGCAGGTGAACTGGGCAGGCTTCTACCTGTACGACGGCCATGAACTCGTGGTGGGTCCGTTCCAGGGCAAACCCGCGTGCATCCGCATCGCGCTGGGCAGGGGCGTCTGCGGCACCGCTGCGCAGACCCGCGAAACCCAGCTGGTGCGCGACGTCAACGCGTTCGCCGGACACATCGCCTGCGACGCCGCCTCGCAATCGGAAATCGTGGTGCCGCTGGTCAAGGCCGACGGCAGCCTGCTCGGCGTGTGGGATGTCGACAGCCCGGTCACCGACCGCTTCGACGAAGACGACCGCGCCGGCATGGAAGCGCTCTGCGCGGTGTTCATGGCATCCGTGCAGGGCTGA
PROTEIN sequence
Length: 164
MFDLKAQTYASKREHYADLVQQARGILAGECDLIANAANFGALVYHSLAQVNWAGFYLYDGHELVVGPFQGKPACIRIALGRGVCGTAAQTRETQLVRDVNAFAGHIACDAASQSEIVVPLVKADGSLLGVWDVDSPVTDRFDEDDRAGMEALCAVFMASVQG*