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scnpilot_solids1_trim150_scaffold_11069_curated_2

Organism: solids_Rhodanobacter_6

partial RP 8 / 55 BSCG 9 / 51 ASCG 2 / 38
Location: comp(203..760)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome-recycling factor n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEI5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 90.3
  • Coverage: 185.0
  • Bit_score: 327
  • Evalue 1.10e-86
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.3
  • Coverage: 185.0
  • Bit_score: 327
  • Evalue 1.50e-86
ribosome recycling factor similarity KEGG
DB: KEGG
  • Identity: 88.6
  • Coverage: 185.0
  • Bit_score: 323
  • Evalue 3.80e-86

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGCTCAACGACATCAAGAACGATGCCCAGGCCCGCATGGGCAAGAGCATCGATTCGCTCAAGCACGACCTCACGCGTATCCGCACCGGCCGCGCCAGCACCACGTTGGTCGACCACATCAAGGTCAGCTACTACGGCGCGGAAACGCCGCTGTCGCAGGTCGCGTCCGTGACGCTGGCCGATGCGCGCACCATCCTCATCACGCCGTGGGAAAAAAACATGGTGGCGCCGATCGAGAAGGCCCTGATGGCATCGGACATCGGCATCACGCCGACCACCGCCGGCACCGTGATCCGGCTCAACATGCCCGCGCTCACCGAGGAGCGTCGCAAGGAGCTGGCCAAGCACGTGGGCCATGAGGGCGAGAACGCCAAGATCGCCATCCGCAACGTGCGCCGCGATGCCCTGCAGCAGGTCAAGGACCTGCTCAGGGACAAGCAGATCACGGAGGACGAGGATCGCCGTTTCGACGACGAGATCCAGAAGCTCACCGATCGCGCGGTCAAGGACGTCGATACCGTGGTCAAGGCCAAGGAAGAGGAGCTGATGGCGCTCTGA
PROTEIN sequence
Length: 186
MLNDIKNDAQARMGKSIDSLKHDLTRIRTGRASTTLVDHIKVSYYGAETPLSQVASVTLADARTILITPWEKNMVAPIEKALMASDIGITPTTAGTVIRLNMPALTEERRKELAKHVGHEGENAKIAIRNVRRDALQQVKDLLRDKQITEDEDRRFDDEIQKLTDRAVKDVDTVVKAKEEELMAL*