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scnpilot_solids1_trim150_scaffold_1955_curated_12

Organism: solids_Rhodanobacter_3

near complete RP 50 / 55 BSCG 48 / 51 MC: 2 ASCG 12 / 38
Location: comp(9140..9715)

Top 3 Functional Annotations

Value Algorithm Source
Isopentenyl-diphosphate Delta-isomerase {ECO:0000256|HAMAP-Rule:MF_00202}; Short=IPP isomerase {ECO:0000256|HAMAP-Rule:MF_00202};; EC=5.3.3.2 {ECO:0000256|HAMAP-Rule:MF_00202};; IPP:DMAPP isomerase {ECO:0000256|HAMAP-Rule:MF_00202}; Isopentenyl pyrophosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00202}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 187.0
  • Bit_score: 368
  • Evalue 6.20e-99
isopentenyl-diphosphate delta-isomerase (EC:5.3.3.2) similarity KEGG
DB: KEGG
  • Identity: 90.4
  • Coverage: 188.0
  • Bit_score: 359
  • Evalue 8.50e-97
Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBT3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 93.0
  • Coverage: 187.0
  • Bit_score: 368
  • Evalue 4.40e-99

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 576
TTGGCTGACGCGTCGCTACGCCACCCCACGGTCTCCTCCGAAGCCGAGCAGCTGATCCTGGTCGATGCCGACGATCGCGCGGTCGGCTACGCCAGCAAGGCGGCCGCCCACGACGGCCGCGGCCAGCGCCATCGTGCGTTCTCGCTGTTCGTCTTCAACGGGCACGGCGAGCTGCTGTTGCAGCAACGCAGCGGCGGCAAGCGGCTGTGGCCCGGCTACTGGGCCAACAGTTGCTGCAGCCACCCGCGCCAGGGAGAAAGCATGGCGCAGGCCACCGAACGGCGCCTGCAGCAGGAGCTGGGCATGCGCTGTCCGCTGCGCTACCTGTTCAAGTTCGAATACCAGGCCGACTACCGCGGCCTCGGCGCCGAACACGAACTGTGCTGGGTCTACGCCGGCACCTGCACGCAGCCGGTGCGCGCCAATCCCACCGAGGTCGCGGCCTGGCGCTTCGTCACGCCGGCCGCGCTCGACCGCGAGATCGCCAGCTGCCCGGAGCGCTTCACGCCGTGGCTGAAGCTCGAATGGGCACGACTGCGCCAGGACCCGACGCTGCCGGCATGGGCCGACGGCTGA
PROTEIN sequence
Length: 192
LADASLRHPTVSSEAEQLILVDADDRAVGYASKAAAHDGRGQRHRAFSLFVFNGHGELLLQQRSGGKRLWPGYWANSCCSHPRQGESMAQATERRLQQELGMRCPLRYLFKFEYQADYRGLGAEHELCWVYAGTCTQPVRANPTEVAAWRFVTPAALDREIASCPERFTPWLKLEWARLRQDPTLPAWADG*