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scnpilot_solids1_trim150_scaffold_1955_curated_19

Organism: solids_Rhodanobacter_3

near complete RP 50 / 55 BSCG 48 / 51 MC: 2 ASCG 12 / 38
Location: 16792..17622

Top 3 Functional Annotations

Value Algorithm Source
shikimate dehydrogenase (EC:1.1.1.25) similarity KEGG
DB: KEGG
  • Identity: 90.9
  • Coverage: 276.0
  • Bit_score: 497
  • Evalue 3.80e-138
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 276.0
  • Bit_score: 497
  • Evalue 1.70e-137
Shikimate dehydrogenase n=2 Tax=Rhodanobacter denitrificans RepID=M4NU95_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 90.9
  • Coverage: 276.0
  • Bit_score: 497
  • Evalue 1.20e-137

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 831
ATGCCAGCCGCCCAGTTCGCCGTGTTCGGCCATCCGATTGGCCATTCGCTGTCGCCGCCGATCCATCAGGCGTTCGCGCGGCAGTTCGGCATCGCGCTGGAATACCGCGCGATCGACGTGGAGCCGGCCGGTTTTGCCGCGGCGGTGCGGCGCTTCTTCGCCGACGGCGGCCGCGGCGCCAACGTCACCCTGCCGCACAAGGCCGCCGCCTTCGCGCTGGCGGACGAACGCAGCGCGGCGGCCACGCGCGCCGGCAGCGCCAACGTGCTGACTCCGCTGGCCGACGGCCGGCTGGCCGCGCACAACACCGACGGCGACGGTCTGGTGCGCGACCTCACCGAGCGTCACCACGTGGACCTGCGCGGCCACACCGCCCTGCTGCTGGGCGCCGGCGGCGCCGCGCACGGCGTGGCGTGGAGCCTGCTGGACGCCGGCGTAGAGACGCTGACCATCGTCAGCCGCAGTGCCGAGCGTGCCGATGCGCTGGCCGACGCGATCGGCGAACCGGCGCGCGCGCATACCCGCTACTGGTCCGACCTGGCCGACATCGGCAGCTACGACCTGATCGTCAACGCCACCTCGGCCGGCGTGCTTGGCGAGTCGCTGCAGCTGCCGCCTTCGCTGATCGGCGCACGCGCGCTGTGCTACGACCTCTCCTATGGAGCCGCCGCCAGCGGCTTCCTGAGCTGGGCGACGGCCGCAGGTGCGCGCTACGCGTTCGACGGCCTCGGCATGCTGGTGGAAACCGCCGCCGATGCATTCGAGCTGTGGCATGGCCAGCGGCCGGATACCGAGCCGGTGTACCAGGCGTTGCGTCGGCAGTCCGCATGA
PROTEIN sequence
Length: 277
MPAAQFAVFGHPIGHSLSPPIHQAFARQFGIALEYRAIDVEPAGFAAAVRRFFADGGRGANVTLPHKAAAFALADERSAAATRAGSANVLTPLADGRLAAHNTDGDGLVRDLTERHHVDLRGHTALLLGAGGAAHGVAWSLLDAGVETLTIVSRSAERADALADAIGEPARAHTRYWSDLADIGSYDLIVNATSAGVLGESLQLPPSLIGARALCYDLSYGAAASGFLSWATAAGARYAFDGLGMLVETAADAFELWHGQRPDTEPVYQALRRQSA*