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scnpilot_solids1_trim150_scaffold_1115_curated_8

Organism: solids_Sphingobacteriales_4

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: comp(5983..7257)

Top 3 Functional Annotations

Value Algorithm Source
Xylose isomerase domain-containing protein TIM barrel n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EC72_RUNSL similarity UNIREF
DB: UNIREF100
  • Identity: 76.7
  • Coverage: 424.0
  • Bit_score: 675
  • Evalue 4.90e-191
xylose isomerase domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 76.7
  • Coverage: 424.0
  • Bit_score: 675
  • Evalue 1.50e-191
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:AEI47603.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.7
  • Coverage: 424.0
  • Bit_score: 675
  • Evalue 6.90e-191

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Taxonomy

Runella slithyformis → Runella → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1275
ATGATACTAAACAAAGAACTGATTGCGGATAATAATAAAAATTATCTGGACGATCATAAAAAAAGATATGCCTGGTTTACAAACGAGATCAAAGATTCAGAAAATATCATAAAAAAGTTAATTGACTTTCAGATAGCTGTTCCCAGTTGGGCGCTGGGCACTGGTGGTACACGTTTTGGAAGGTTTGGCGGTGGCGGCGAACCGCGTAGCCTGGAAGAAAAAATTGAAGATATTGGCTTGCTACACGCGCTTACCCGCTCAAGTGATGCCATCTCTTTGCACATACCCTGGGATATTCCTTCCGATCCTGAAAATATAAAAGCGCTTGCAAAGCAAAACGGGCTTCGTTTTGATGCGATGAACTCCAATACTTTCCAGGATCAGCCCGGTCAAAAATTGAGTTATAAATTTGGCTCGATGCAGCATGTAGATAAAGCAGTGCGCCAACAGGCAATTGATCATAATATCGAAGTAATAAAATATGGCATTGAACTGGGGTCGCAATCGCTTACTGTGTGGCTAAGCGATGGCTCCTGTTTTCCCGGCCAGTTGAATTTTAGAAAAGTGTTTCAGAATACATTGGAAAGTTTACAGGAAGTATATAAGGCCTTGCCCGATGATTGGAAAATGTTTGTAGAATACAAAGCTTATGAACCTAATTTTTATTCAACAACTGTGGGCGATTGGGGTCAGTCTTTTCTTTATGCATCAAAGCTTGGAAGCAAAGCCTACACTTTAGTTGATCTTGGCCATCATCTCGCTAATGCCAACATAGAGCAGATCGTTGCTTTATTGCTAATGGAAGGAAAGCTTGGGGGCTTTCATTTTAATGATTCAAAATACGGAGACGACGACCTTACTGTAGGAAGCATTAAGCCCTACCAATTGTTCCTTATCTTTAATGAATTGGTAGAAGGTATGGATGCAAGGAAAATGAATCATGCAAAAGATTTAGGATGGATGATTGATGCTTCGCATAATGTGAAAGATCCGCTTGAAGATCTCCTTCAATCTTTACAGGCGATCAAAATTTCTTATGCAAAAGCATTATTGGTTGATAGAGAAAAATTGACAGAAGCCCAAAACAATAATGATGTAGTTGCTGCGCAGGAAATTATTCAGCAGGCATTTAATACTGATGTACGTCCGCTTATAGCTGAAGCAAGATTGCGCGAAGGCGGTGCATTGAATCCGTTGTCAGTATTTCGCAACGAAAAAGTAAGAGAGAATTTGATAAAAGAAAGAGGAATGAAAACGATGGCAACGGGATTGTGA
PROTEIN sequence
Length: 425
MILNKELIADNNKNYLDDHKKRYAWFTNEIKDSENIIKKLIDFQIAVPSWALGTGGTRFGRFGGGGEPRSLEEKIEDIGLLHALTRSSDAISLHIPWDIPSDPENIKALAKQNGLRFDAMNSNTFQDQPGQKLSYKFGSMQHVDKAVRQQAIDHNIEVIKYGIELGSQSLTVWLSDGSCFPGQLNFRKVFQNTLESLQEVYKALPDDWKMFVEYKAYEPNFYSTTVGDWGQSFLYASKLGSKAYTLVDLGHHLANANIEQIVALLLMEGKLGGFHFNDSKYGDDDLTVGSIKPYQLFLIFNELVEGMDARKMNHAKDLGWMIDASHNVKDPLEDLLQSLQAIKISYAKALLVDREKLTEAQNNNDVVAAQEIIQQAFNTDVRPLIAEARLREGGALNPLSVFRNEKVRENLIKERGMKTMATGL*