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scnpilot_solids1_trim150_scaffold_147_curated_17

Organism: solids_Sphingobacteriales_4

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: 24495..25067

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YE34_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 41.6
  • Coverage: 185.0
  • Bit_score: 152
  • Evalue 5.00e-34
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EHQ25212.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.6
  • Coverage: 185.0
  • Bit_score: 152
  • Evalue 7.00e-34
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 42.4
  • Coverage: 165.0
  • Bit_score: 143
  • Evalue 9.50e-32

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Taxonomy

Mucilaginibacter paludis → Mucilaginibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 573
TTGCAAATATCGGAAGGCGATGAATACGCTTTTCGTATATTGTTCGATCAGTACCGAAATAAGATATTTTCTATAGCATGGAAAATTACCGGGGTGAAATCTGCAGCGGAAGATGTAGTTCAGGAAGTGTTTATCAAATTGTGGATGAACAGGGAAAAACTGGTTGAAGTTGAAAATTTTAATGCATATCTGAACACGATTACCCGCAATCACATTTTGAATAATTTGAGAAAGGTTGCTTATGAACAAACTTTCCTGGAAGACTTGATCAGACAACAATCTGTAAATACCAAAAATGCTTCCGATCCTGTACTTTATAGCGAATTGCAAAATCTTCTACATAGAGCCATTCAACAACTCCCGCCACAACAGAAAAAAGTTTTTCAATTAAGCAGAGAGAATGGATTGAAGCATACAGAGATCGCTTCGAAACTGAACATTTCACAATCTACTGTAAAAGGCCATATAGTGGAAGCCCTTCGATCAATTAAGGCTTTTTTAAATGCTCACGAAGGTGTGATAAGTTTATTGATCCTGTTACAGGCCTGTCCATTGTTGTTCAGCTTGCTGTAA
PROTEIN sequence
Length: 191
LQISEGDEYAFRILFDQYRNKIFSIAWKITGVKSAAEDVVQEVFIKLWMNREKLVEVENFNAYLNTITRNHILNNLRKVAYEQTFLEDLIRQQSVNTKNASDPVLYSELQNLLHRAIQQLPPQQKKVFQLSRENGLKHTEIASKLNISQSTVKGHIVEALRSIKAFLNAHEGVISLLILLQACPLLFSLL*