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scnpilot_solids1_trim150_scaffold_28904_curated_1

Organism: solids_Sphingopyxis_1

partial RP 38 / 55 BSCG 38 / 51 MC: 1 ASCG 4 / 38
Location: 3..1325

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 441.0
  • Bit_score: 864
  • Evalue 4.90e-248
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 95.5
  • Coverage: 441.0
  • Bit_score: 835
  • Evalue 9.30e-240
DNA-directed RNA polymerase subunit beta' n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UVX5_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 441.0
  • Bit_score: 864
  • Evalue 3.50e-248

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1323
GAGGGCAAGGCGATCCAGCTTCACCCGCTGGTCTGCGCCGCGTTCAACGCCGACTTCGACGGCGACCAGATGGCCGTGCACGTCCCGCTGAGCCTCGAAGCGCAGCTGGAAGCGCGCGTGCTGATGATGTCGACCAACAACATCCTCAGCCCCGCGAACGGCAAGCCGATCATCGTTCCGTCGCAGGACATGGTCCTCGGCCTCTATTATCTGTCGATGGAACGCGAAGGCGAACCGGGCGAGGGGATGCTGCTGGCCGACATGGCCGAAGTGCACCAGGCGCTCTACACGGGCGCGGTCACGCTGCACTCGAAGATCACCAGCCGCGTTCCGCAGACCGACGAAGCCGGCAATGAATATCTGCGCCGCTTCGAAACGACGCCGGGCCGCATGCTGATCGGCGAATGCCTGCCGAAGTCGCACACCGTGCCCTTCGACGTCGTCAACCGCCTTCTGACCAAGAAGGAAATCGGCGACGTGATCGACCAGGTCTATCGTCACACCGGCCAGAAGGAGACGGTGCTGTTCGCCGACGCGATCATGGCGCTGGGCTTCCGCCACGCGTTCCGTGCCGGCATCTCGTTCGGCAAGGACGACATGATCATCCCCGACGCCAAGGAAAAGCTGGTCGACGAGACCCGCGCGCTGGTGAAGGATTTCGAGCAGCAGTATCAGGACGGCCTGATCACGCAGCAGGAAAAGTACAACAAGGCGATCGACGCCTGGTCGCAGTGCGGCGACAAGGTCGCGAACGCGATGATGGACGAAATCCGGGCGACGCCGAAGCTCGACGACGGCCGGCTTGCTCCGGTCAACTCGATCTACATGATGGCGCACTCGGGCGCGCGTGGTTCGCCGGCGCAGATGAAGCAGCTTGCCGGCATGCGCGGCCTTATGGCCAAGCCGTCGGGCGAGATCATCGAAACGCCGATCATCTCGAACTTCAAGGAAGGCCTGACCGTTCTCGAGTATTTCAACTCGACCCACGGTGCCCGTAAGGGTCTGGCCGACACCGCGCTCAAGACGGCGAACTCGGGTTACCTGACCCGCCGTCTGGTCGACGTCTCGCAGGATTGCGTTGTCATCGAGGATGATTGCGGCACGACCCGCGGCATGGAAATGCGCGCGATCATCCAGGGCGGTTCGACGATCGCCTCGCTGGGCGAGCGCATCCTGGGCCGCACGACGCTCGAGGATGTTGTCGACAAGGACGGCAATGTCATTGCCCCCGTCGGCACGCTGCTCGACGAACCCACGGTCGCCAAGATCGAGGAAGCCGAAGTGCAGGCGGTGAAGATCCGCTCGCCGCTGGTCTGCGAAGCC
PROTEIN sequence
Length: 441
EGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQLEARVLMMSTNNILSPANGKPIIVPSQDMVLGLYYLSMEREGEPGEGMLLADMAEVHQALYTGAVTLHSKITSRVPQTDEAGNEYLRRFETTPGRMLIGECLPKSHTVPFDVVNRLLTKKEIGDVIDQVYRHTGQKETVLFADAIMALGFRHAFRAGISFGKDDMIIPDAKEKLVDETRALVKDFEQQYQDGLITQQEKYNKAIDAWSQCGDKVANAMMDEIRATPKLDDGRLAPVNSIYMMAHSGARGSPAQMKQLAGMRGLMAKPSGEIIETPIISNFKEGLTVLEYFNSTHGARKGLADTALKTANSGYLTRRLVDVSQDCVVIEDDCGTTRGMEMRAIIQGGSTIASLGERILGRTTLEDVVDKDGNVIAPVGTLLDEPTVAKIEEAEVQAVKIRSPLVCEA