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scnpilot_solids1_trim150_scaffold_19809_curated_1

Organism: solids_Sphingopyxis_1

partial RP 38 / 55 BSCG 38 / 51 MC: 1 ASCG 4 / 38
Location: comp(2..274)

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 91.0
  • Bit_score: 182
  • Evalue 2.30e-43
dapF; diaminopimelate epimerase; K01778 diaminopimelate epimerase [EC:5.1.1.7] similarity KEGG
DB: KEGG
  • Identity: 93.4
  • Coverage: 91.0
  • Bit_score: 174
  • Evalue 1.80e-41
Diaminopimelate epimerase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UU61_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 91.0
  • Bit_score: 182
  • Evalue 1.60e-43

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 273
ATGGCGGACCGCTTCACCAAGATGCATGGCCTCGGCAACGACTTCGTCGTGATCGATGCGCGCGCGAAAAGCGTCGAGATGACGCCGGCGCGGGCGCATGCGATTGCCGATCGCCGCCACGGCATCGGCTGCGACCAGCTTATCCTGCTCGAACCGTCGTCGAAGGCCGACGTCAAAATGCGTATCTTCAACGCCGATGGCAGCGAGGTCGAGGCGTGCGGCAATGCGACGCGCTGCGTCGCCACGCTGATCGGCAAGCCCGCAGTCATCGAA
PROTEIN sequence
Length: 91
MADRFTKMHGLGNDFVVIDARAKSVEMTPARAHAIADRRHGIGCDQLILLEPSSKADVKMRIFNADGSEVEACGNATRCVATLIGKPAVIE