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scnpilot_solids1_trim150_scaffold_7044_curated_2

Organism: solids_Sphingopyxis_1

partial RP 38 / 55 BSCG 38 / 51 MC: 1 ASCG 4 / 38
Location: 609..1349

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 246.0
  • Bit_score: 495
  • Evalue 4.40e-137
truA; tRNA pseudouridine synthase A; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] similarity KEGG
DB: KEGG
  • Identity: 81.3
  • Coverage: 246.0
  • Bit_score: 423
  • Evalue 4.70e-116
tRNA pseudouridine synthase A n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WGD9_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 98.8
  • Coverage: 246.0
  • Bit_score: 495
  • Evalue 3.10e-137

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 741
ATGACCCGCTTCGCCCTCACCATCGAATATGACGGCCGCCCCTTCATGGGCTGGCAGCGCCAGTCGCATGGCCCCAGCGTTCAGCAGGCGATCGAGGAAGCCGTCACGCGCATCACCGCCGAAACGGCGCCCGTTCACGGCGCCGGGCGCACCGACGCCGGGGTGCATGCGATCGCGATGCGCGCGCATGTCGACATCGAAAAGGCGATCCAGCCCTTTCGCCTGATGGAAGCGCTGAACGCCCAGCTTCGCCCCGCGCCGGTGGCGATCCTTGCGTGCGAGACGGTCGCCGACGACTGGCACGCGCGCTTTTCGTGCATCGGCCGCGCCTATGAATATCGCATCGTCAACCGCCGCGCGCCGCTGACCTGGGACAAGGGGCTCGCCTGGCAATTTGCGAAGCCGCTCGACGCCGAAGCGATGCACGGCGCGGCACAGGCGCTGGTGGGGCGGCACGATTTCACCACCTTCCGCTCGGTGCATTGCCAGGCCGAAAGCGCGGTGAAGACGCTCGACCGCCTGTCGGTCAGCCGCCATGGCGACGAAATCGTCATCGAAGCCGCGGCGCGCAGCTTTCTGCATCATCAGGTTCGATCGATGGTCGGCTGCCTCACCCTCGTCGGCGAAGGCAAATGGTCGGCGCGCGATTTGAAGGCCGCGCTCGACGCCGCCGACCGGCAGGCGCTCGGCCTCAACGCACCGCCCGACGGCCTCTATTTCATCGAAGCAAAATATCCCTGA
PROTEIN sequence
Length: 247
MTRFALTIEYDGRPFMGWQRQSHGPSVQQAIEEAVTRITAETAPVHGAGRTDAGVHAIAMRAHVDIEKAIQPFRLMEALNAQLRPAPVAILACETVADDWHARFSCIGRAYEYRIVNRRAPLTWDKGLAWQFAKPLDAEAMHGAAQALVGRHDFTTFRSVHCQAESAVKTLDRLSVSRHGDEIVIEAAARSFLHHQVRSMVGCLTLVGEGKWSARDLKAALDAADRQALGLNAPPDGLYFIEAKYP*