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scnpilot_solids1_trim150_scaffold_24248_curated_2

Organism: solids_Sphingopyxis_1

partial RP 38 / 55 BSCG 38 / 51 MC: 1 ASCG 4 / 38
Location: 683..1426

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase, Rsu; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] similarity KEGG
DB: KEGG
  • Identity: 88.4
  • Coverage: 249.0
  • Bit_score: 432
  • Evalue 7.80e-119
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.4
  • Coverage: 249.0
  • Bit_score: 432
  • Evalue 3.50e-118
Pseudouridine synthase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GU97_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 88.4
  • Coverage: 249.0
  • Bit_score: 432
  • Evalue 2.50e-118

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Taxonomy

Sphingopyxis alaskensis → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 744
ATGACGACACGCCGCCCACCCCGTTCGCCGTCCCGCCCGCCCGCTTCCCCGCAGGGCGACGCTCCGCGTGGCCGCCGCAGCGCGCGCGCTGCACAACCGCCGCGTAAGGCTCCGCCCAAGGAAGAGGAGCGCGAGGACGGGCCGCAGCGCATCACCAAGCTCCTGGCGCGCGCTGGCGTCGGGTCACGGCGCGATGTCGAACGAATGATCGAGGAAGGCCGCATTGCACTGAACGGCGCGGTGATCGTGCAACCGGCGCCGCTGCTCTCATCGCTCGAGGGCTTGACCGTCGACGGCAATCCGGTCGCAAAGCCCGTATCGACGCGCCTCTATCGCTTCTACAAGCCGGTCGGCTGCCTAACCGCGGCGCGAGACCCCAAGGGACGCAAGACGATTTATGACGTGCTGCCCAAGGGGCTGCCGCGGCTGATGCCCGTCGGGCGGCTCGACTATAATACCGAGGGCTTGCTGTTGCTGACCAATGACGGCGAATTCAAGCGCCAGCTCGAACTGCCCGCCAGCGGGGTCGAGCGCACCTATCGCGCCCGCGCGTTTGGCGACATCAGCCAAGCGCAGCTCGAGGAACTGGTCGAGGGGGTCGAGATCGACGGGGTCCGCTATGGCAAGATCGACGCCAATCTCGAACGGCGGACGGGGCGCAACCAGTGGATCGAGCTGACGCTGACCGAGGGCAAGAATCGCGAGGTTCGCCGCGTGCTCGAACATCTGGGGCTGCAGGTGAGC
PROTEIN sequence
Length: 248
MTTRRPPRSPSRPPASPQGDAPRGRRSARAAQPPRKAPPKEEEREDGPQRITKLLARAGVGSRRDVERMIEEGRIALNGAVIVQPAPLLSSLEGLTVDGNPVAKPVSTRLYRFYKPVGCLTAARDPKGRKTIYDVLPKGLPRLMPVGRLDYNTEGLLLLTNDGEFKRQLELPASGVERTYRARAFGDISQAQLEELVEGVEIDGVRYGKIDANLERRTGRNQWIELTLTEGKNREVRRVLEHLGLQVS