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scnpilot_solids1_trim150_scaffold_14855_curated_3

Organism: solids_Sphingopyxis_2

partial RP 29 / 55 BSCG 30 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 678..1703

Top 3 Functional Annotations

Value Algorithm Source
Sigma54 specific transcriptional regulator, Fis family n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GWP3_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 89.8
  • Coverage: 344.0
  • Bit_score: 613
  • Evalue 1.10e-172
Sigma-54 dependent transcription regulator {ECO:0000313|EMBL:KGB57933.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.1
  • Coverage: 342.0
  • Bit_score: 614
  • Evalue 8.90e-173
sigma-54 dependent trancsriptional regulator; K03974 psp operon transcriptional activator similarity KEGG
DB: KEGG
  • Identity: 89.8
  • Coverage: 344.0
  • Bit_score: 613
  • Evalue 3.40e-173

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Taxonomy

Sphingopyxis sp. LC363 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1026
ATGGAGCGCGAAACGCAGTTCATCGGGCAATCGGCGGCCTTTCAGGATGCGGTCGACCGCGCGAGCCAGGCGGCGCTGCTCGACCGCCCGGTGCTGGTGATCGGCGAGCGCGGCACCGGCAAGGAACTGATCGCCGAACGCCTGCACCGCCTGTCGGCACGCTGGGACAAGCCCTATGTGATTCTGAACTGCGCCGCGATGCCCGAGACGCTGATCGAGGCCGAACTGTTCGGACACGAGGCGGGCGCGTTCACCGGCGCAACACGCAGCCGCGCGGGCCGTTTCGAGGAAGCCGACGGCGGCACATTATTCCTCGACGAACTGGCGACGATGTCGATGGCGGCGCAGGAGCGGTTGCTGCGCGCGGTCGAATATGGCGAGATCACGCGCGTCGGCGCGTCGCGCCCGGTGCGCGTCGACGTCCGCATCGTCGCGGCGACCAACGAGCATCTGCCCGCGCTGGTCGAGGATAACCGCTTTCGCGCCGACCTGCTCGACCGGCTGTCGTTCGAGGTCATCACCCTGCCCCCACTGCGCGCGCGCGAGGGCGATATCGAAGTGCTCGCGACCTATTTCGGGCAGCGCATGGCGGCGGTGCTCGGCTGGGAGGAATGGCCGGGCTTCGGCCCGCGCGCGCTCGCGGCGATGGAAGGGCACGACTGGCCGGGCAACGTCCGCGAACTGCGCAACGTCATCGAGCGCGCCATCTATCGCTGGGCCGACGCGACCCGTCCGGTCGACGCGCTGAGCTTCGACCCCTTCGCGAGCCCGTGGCAACCCACGGCGCAGCGCAAATCCGCCGCGCCCGCCTCCGTGCCTTCGGCCGCAGTCAGCGAAGCCGCCCCGGCCGCGCCATCTTCGGGGTCGGTCAGCGACCTGCGCGCCGCGGTCGACGGCTATGAAAGGCAGATCCTCGCCGACACGATGGCGCGCTGCCGCTATAACCAGAAGGTCGCGGCTGAGGCGCTGGGGCTCAGCTACGACCAGATTCGCCATGCGCTGAAGAAGCATGGGCTGAATCAATAA
PROTEIN sequence
Length: 342
MERETQFIGQSAAFQDAVDRASQAALLDRPVLVIGERGTGKELIAERLHRLSARWDKPYVILNCAAMPETLIEAELFGHEAGAFTGATRSRAGRFEEADGGTLFLDELATMSMAAQERLLRAVEYGEITRVGASRPVRVDVRIVAATNEHLPALVEDNRFRADLLDRLSFEVITLPPLRAREGDIEVLATYFGQRMAAVLGWEEWPGFGPRALAAMEGHDWPGNVRELRNVIERAIYRWADATRPVDALSFDPFASPWQPTAQRKSAAPASVPSAAVSEAAPAAPSSGSVSDLRAAVDGYERQILADTMARCRYNQKVAAEALGLSYDQIRHALKKHGLNQ*