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scnpilot_solids1_trim150_scaffold_17759_curated_2

Organism: solids_Sphingopyxis_2

partial RP 29 / 55 BSCG 30 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 402..1193

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GU67_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 88.2
  • Coverage: 263.0
  • Bit_score: 451
  • Evalue 7.20e-124
LysR family transcriptional regulator {ECO:0000313|EMBL:KGB57295.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 263.0
  • Bit_score: 467
  • Evalue 1.00e-128
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 88.2
  • Coverage: 263.0
  • Bit_score: 451
  • Evalue 2.30e-124

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Taxonomy

Sphingopyxis sp. LC363 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 792
ATGAAGCGCACCCACCTGCCGCTGAACGCCCTGCGCGTGTTCGATGCCGCTGCCCGGCACCTCAGCTTCACGCGCGCCGCCGACGAACTGGCGGTGACTCCCGCCGCCGTCGGGCAACAGATACGCGCGCTGGAGGATATGCTCGGCGTCGTCCTGTTCCGCCGCACCCCGAAGGGGCTGGAACTGACGGGAGAGGCGACCGCCGGGNNNNNNNNNNNNNNNNNNNNNNNNNNGATGTTCGAGGAATCGGTGCGCGCGATGCAGGCGGGCCAGTCGTCGCAATCGCTGACGATCGCCGCGCCGCGCGACCTGACCGCCAAATGGCTCGCGCCCAGGCTCGCGCGTTACAGCCAGCAGGCGCCCGACGTCCGCTTCACGCTGGTGTCGGCCGACGACGGCATCGACTTCACCGAGGCGAACCTCGACCTCGCGATCTTCTGGACCGACGGCGCCGGCGAGCATGAGGGCGTGCCGCTGTCCGAAGCGCATATGGTGACGGTCGCGGGACACGGCAGCGAGAGCGAGACGCGCATCGCGTGGCCCGGCTGCCCGGTCGAGGACGGCGAGCCCGCGCTGCGGCTCGGCGATGCGGGCCTTGCGATCGACGCCGCGGCGAACGGGCTGGGGCAGGCGAATGTCCCGGCGATGCTGGCGGAGGCCGATCTGGCGGCGGGGCGCGTCCGGCTGGTGCGCGAGCCTTTCGCCGTGAAGCGCGGCTACTGGCTCGTCGCCCCCTTGCCGCAATGGCGGCAGGCGAAGGTCAAGGCGCTGGTGGCGGCGCTGACGGCGTGA
PROTEIN sequence
Length: 264
MKRTHLPLNALRVFDAAARHLSFTRAADELAVTPAAVGQQIRALEDMLGVVLFRRTPKGLELTGEATAGXXXXXXXXXMFEESVRAMQAGQSSQSLTIAAPRDLTAKWLAPRLARYSQQAPDVRFTLVSADDGIDFTEANLDLAIFWTDGAGEHEGVPLSEAHMVTVAGHGSESETRIAWPGCPVEDGEPALRLGDAGLAIDAAANGLGQANVPAMLAEADLAAGRVRLVREPFAVKRGYWLVAPLPQWRQAKVKALVAALTA*