ggKbase home page

scnpilot_solids1_trim150_scaffold_17372_curated_1

Organism: solids_Sphingopyxis_2

partial RP 29 / 55 BSCG 30 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 1..369

Top 3 Functional Annotations

Value Algorithm Source
Transcription factor jumonji, JmjC n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GRU3_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 87.7
  • Coverage: 122.0
  • Bit_score: 236
  • Evalue 1.30e-59
Transcription factor jumonji, JmjC {ECO:0000313|EMBL:AJA09898.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.5
  • Coverage: 122.0
  • Bit_score: 238
  • Evalue 6.20e-60
transcription factor jumonji, JmjC similarity KEGG
DB: KEGG
  • Identity: 87.7
  • Coverage: 122.0
  • Bit_score: 236
  • Evalue 4.10e-60

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis fribergensis → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 369
TGGCCCGCGGGGGACGAGCGCTTCGCCGACCGGCGCGAGCATGAGCGCTATCACACCGGCGGCCATCGCAACCTGCCGTGGCAGGACGCCTTTCGCGGCGGCGAGCAGCAGGTACCGCTCGGTCCCGGCGACGCGGTGCTGGTGCCGGTGATGGCCCCGCATTTCGTCGCCAACGGCGATGCGCCGTCGATCTCGCTGTCGATCACCTGGCGCAGCGAATGGAGCTATCGCGAGTCCGAGGCGCACGCCGCCAACGCGCTGCTGCGGCGTCTGGGGCTCGACCCCGCGATGCCGCCGCGCTGGCCGGACTATGCGCGGGCAAAGACGGTGGGCTGGCGGATCGCCCGGAAACTCAAGCTGGTGTCATGA
PROTEIN sequence
Length: 123
WPAGDERFADRREHERYHTGGHRNLPWQDAFRGGEQQVPLGPGDAVLVPVMAPHFVANGDAPSISLSITWRSEWSYRESEAHAANALLRRLGLDPAMPPRWPDYARAKTVGWRIARKLKLVS*