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scnpilot_solids1_trim150_scaffold_8396_curated_1

Organism: solids_Sphingopyxis_2

partial RP 29 / 55 BSCG 30 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(3..365)

Top 3 Functional Annotations

Value Algorithm Source
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.; similarity UNIPROT
DB: UniProtKB
  • Identity: 75.2
  • Coverage: 121.0
  • Bit_score: 169
  • Evalue 2.70e-39
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase; K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] similarity KEGG
DB: KEGG
  • Identity: 73.6
  • Coverage: 121.0
  • Bit_score: 168
  • Evalue 1.30e-39
tRNA dimethylallyltransferase n=1 Tax=Sphingobium ummariense RL-3 RepID=T0IRL0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 75.2
  • Coverage: 121.0
  • Bit_score: 169
  • Evalue 1.90e-39

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Taxonomy

Sphingobium ummariense → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 363
GTGGCGCTTATCGCCGGGCCGACCGCCAGCGGCAAGAGCGCCCTTGCCGTCGCCTTGGCGCAGGCGGTGGGGCGTGCGCAAGTCATCAATGCCGATGCCAGCCAGGTCTATCGCGACCTGACCATCCTGTCGGCGCGCCCGACCGCGGCGGAGATGCAGGGCGTCCCGCATCATCTGTTCGGTCATGTCGACGGGGCGGACGGCGCCTATCACGCGGCGCGCTGGGCCGCCGAAGCGCGCCGTGCGCTGGCCCGTGCGTGGGAGGACGACGATATCCCGATCCTGGTCGGCGGGACCGGCCTCTATCTGCGCACGCTGCTCGACGGCATCGCGCCGGTGCCCGCGATCGCCCCCGATATTCGC
PROTEIN sequence
Length: 121
VALIAGPTASGKSALAVALAQAVGRAQVINADASQVYRDLTILSARPTAAEMQGVPHHLFGHVDGADGAYHAARWAAEARRALARAWEDDDIPILVGGTGLYLRTLLDGIAPVPAIAPDIR