ggKbase home page

scnpilot_solids1_trim150_scaffold_31289_curated_1

Organism: solids_Sphingopyxis_2

partial RP 29 / 55 BSCG 30 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 1..237

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GRW6_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 91.0
  • Coverage: 78.0
  • Bit_score: 149
  • Evalue 1.70e-33
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein similarity KEGG
DB: KEGG
  • Identity: 91.0
  • Coverage: 78.0
  • Bit_score: 149
  • Evalue 5.50e-34
TonB-dependent receptor {ECO:0000313|EMBL:ABF53606.1}; Flags: Precursor;; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.0
  • Coverage: 78.0
  • Bit_score: 149
  • Evalue 2.40e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis alaskensis → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 237
GTCGAATGGACCGACGACCAGACCCGCATCGCGGCCTTCGAGACGCCGACCAAGGGCTTCACGCTGGTCAACGCGTCGATCAGCTGGCGCCCGCTCCCCGAGGCGCGGCATCTGACGCTGTCGTTGGCGGCGAACAATATCTTCGACGTCGACGCGCGGCGCCACGCGAGCTTCACCAAGGATTTCGTGCCCCTCGCCGGCCGCGACATCCGCCTCACCGCACGGGCGAGTTTCTAG
PROTEIN sequence
Length: 79
VEWTDDQTRIAAFETPTKGFTLVNASISWRPLPEARHLTLSLAANNIFDVDARRHASFTKDFVPLAGRDIRLTARASF*