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scnpilot_solids1_trim150_scaffold_13523_curated_1

Organism: solids_Sphingopyxis_2

partial RP 29 / 55 BSCG 30 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 2..475

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.1
  • Coverage: 157.0
  • Bit_score: 290
  • Evalue 1.00e-75
pseudouridine synthase, Rsu; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] similarity KEGG
DB: KEGG
  • Identity: 87.3
  • Coverage: 157.0
  • Bit_score: 280
  • Evalue 4.10e-73
Pseudouridine synthase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WBY4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 91.1
  • Coverage: 157.0
  • Bit_score: 290
  • Evalue 7.40e-76

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 474
GGCCGCAAGACGATCTACGACATCCTGCCCAAAGGCCTGCCGCGGCTGATGCCGGTGGGGCGGCTCGACTATAACACCGAGGGGCTGCTGCTGCTGACCAACGACGGCGAATTCAAGCGCCAGCTCGAACTGCCCTCGAGCGGGGTCGAACGCAGCTATCGCGCGCGCGCCTTTGGCGAGATCAGCCAGGCGCAGCTCGAGGAACTGGCGCTCGGCATCACCATCGACGGCATCCGCTATGGAAAGATCGACGCCAACCTCGAACGCCGCACCGGGCGCAACCAGTGGATCGAACTGACGCTGACCGAGGGCAAGAACCGCGAGGTGCGCCGCGTGCTCGAACATCTGAGCTTGCAGGTCAGCCGGCTGATCCGGACGCGCTACGGCGCCTTCTCCCTCGACGGGCTCGACAGCGGGGCGGTCGAGATCGTGCCGCGCGACGCGCTGTTCCAGTTTCGCCGGCGGATGGGCTGA
PROTEIN sequence
Length: 158
GRKTIYDILPKGLPRLMPVGRLDYNTEGLLLLTNDGEFKRQLELPSSGVERSYRARAFGEISQAQLEELALGITIDGIRYGKIDANLERRTGRNQWIELTLTEGKNREVRRVLEHLSLQVSRLIRTRYGAFSLDGLDSGAVEIVPRDALFQFRRRMG*