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scnpilot_solids1_trim150_scaffold_34170_curated_2

Organism: solids_Sphingopyxis_2

partial RP 29 / 55 BSCG 30 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(218..1123)

Top 3 Functional Annotations

Value Algorithm Source
Putative branched-chain amino acid ABC transporter, periplasmic component n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AGF3_AZOBR similarity UNIREF
DB: UNIREF100
  • Identity: 46.4
  • Coverage: 304.0
  • Bit_score: 274
  • Evalue 1.80e-70
Extracellular ligand-binding receptor {ECO:0000313|EMBL:CDO59818.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.2
  • Coverage: 303.0
  • Bit_score: 282
  • Evalue 5.40e-73
putative branched-chain amino acid ABC transporter, periplasmic component similarity KEGG
DB: KEGG
  • Identity: 46.4
  • Coverage: 304.0
  • Bit_score: 274
  • Evalue 5.60e-71

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Taxonomy

Candidatus Phaeomarinobacter ectocarpi → Candidatus Phaeomarinobacter → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 906
TTGATGCCGGTGGATGAAGGCAGCAACCCGGCCGAAACCGCCGCCGCGGCGCGCAAGCTTCTGGATCAGGGGGCGGAGATTATTATCGGGCCGTTGTTCGCCTCCGCCGTTTCCGCCGTGGCACCCATCGCGCGCGACCGCGGTGTGCCGGTGCTCGCCTTCTCGACCGACCGCACTGTGGCGGGCCACGGGGTTTACCTGTTGAGCTTCCAGCCCGAAGACGAAGTGCGCGCGATCGTCACCTATGCCGCAAGCCAGGGCCATACCCGCTTTGCCGCGCTGACACCCCTGACCCCTTATGGCGACCGGGTGACAGCGGCTTTTCGCACCACAGTCCAGGATGTGAAAGGCACGGTTTCGGGAATCGAACGCTTCGATCCTTCGTCCGGCACCGCGGTGGCGCAATCCGCCGCCATAGCAAAGGGTCAGCCCGATTCGGTGCTGATCGCACAGGGCGGCGCGTTGTTGCGCGGCATTGCGCCGACACTGGTGGTGAACGGGCTTCCGCCGGAGACGGTCAAATATCTCGGCACCGGGGTGTGGGACGACCCCACCATTGCACAGGAACCGGCGCTGCAGGGCGGCTGGTTCGCCGCCCCCACCCCCAATGCGCAGGATGGTTTCGACGCCCGATTCCACGCCGTGTTCGGCACCACGCCGCCACAGCTTGCCACCCTTCCTTACGATGCAGTGTCGCTGGTGGCGCTATTGTCGGCGGGCGAACCCTATCACCGCTTCACCGATGCGGCCTTGACCGATCCCAACGGTTTCGCCGGTGTGGACGGGATTTTCCGCTTCTTCCCCGATGGTTCGGACGAGCGCGGGCTTGCCATTCTGCGGGTGGCGCCGGACGGCTTTCAGATTCAGCAGCCGGCGCCGGCCACCTTCCAGCCACTCGGTGGATAA
PROTEIN sequence
Length: 302
LMPVDEGSNPAETAAAARKLLDQGAEIIIGPLFASAVSAVAPIARDRGVPVLAFSTDRTVAGHGVYLLSFQPEDEVRAIVTYAASQGHTRFAALTPLTPYGDRVTAAFRTTVQDVKGTVSGIERFDPSSGTAVAQSAAIAKGQPDSVLIAQGGALLRGIAPTLVVNGLPPETVKYLGTGVWDDPTIAQEPALQGGWFAAPTPNAQDGFDARFHAVFGTTPPQLATLPYDAVSLVALLSAGEPYHRFTDAALTDPNGFAGVDGIFRFFPDGSDERGLAILRVAPDGFQIQQPAPATFQPLGG*