ggKbase home page

scnpilot_solids1_trim150_scaffold_69_curated_79

Organism: solids_Stenotrophomonas_1

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: 103593..104108

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=92824 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. cannabis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.4
  • Coverage: 171.0
  • Bit_score: 295
  • Evalue 4.60e-77
def; peptide deformylase; K01462 peptide deformylase [EC:3.5.1.88] similarity KEGG
DB: KEGG
  • Identity: 83.0
  • Coverage: 171.0
  • Bit_score: 291
  • Evalue 1.90e-76
Peptide deformylase 2 n=2 Tax=Xanthomonas RepID=V7Z8V3_9XANT similarity UNIREF
DB: UNIREF100
  • Identity: 84.8
  • Coverage: 171.0
  • Bit_score: 294
  • Evalue 9.50e-77

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Xanthomonas campestris → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 516
ATGGCCCTCCTGCCCATTCTCGAATTCCCCGACCCGCGGCTGCGCACCAAGGCGGTCCCGGTCGACCCTGCCGAAGTGACCACCCCGGCGTTCCAGCAGCTGCTCGACGACATGTTCCAGACCATGTACGACGCCCCCGGCATCGGCCTGGCCGCCAGCCAGGTGGACGTGCACAAGCGCTTCATGGTGATCGACGTGAGCGAGGAGCACGATGCGCCGCAGGTCTTCATCAACCCGCAGATCGCCAGCGCCAGCGAGGGTGGCCGGGTCTACCAGGAAGGCTGCCTGTCGGTGCCCGGCATCTATGCCGACGTGACCCGTGCCGACAGCATCGTGGTGCGCTTCCTCGACCGCGAGGGCCACGCGCAGGAGCTGGAGGCCGAAGGCCTGCTGGCCACCTGCATCCAGCACGAGATGGACCACCTGGACGGCAAGCTGTTCATCGATTACCTCTCGCCGCTCAAGCGCGAGATGGTGCGCAAGAAGCTGGCCAAGCAGCGCAAGCACGTCGCCTGA
PROTEIN sequence
Length: 172
MALLPILEFPDPRLRTKAVPVDPAEVTTPAFQQLLDDMFQTMYDAPGIGLAASQVDVHKRFMVIDVSEEHDAPQVFINPQIASASEGGRVYQEGCLSVPGIYADVTRADSIVVRFLDREGHAQELEAEGLLATCIQHEMDHLDGKLFIDYLSPLKREMVRKKLAKQRKHVA*