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scnpilot_solids1_trim150_scaffold_283_curated_19

Organism: solids_Stenotrophomonas_1

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: comp(21384..22196)

Top 3 Functional Annotations

Value Algorithm Source
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. graminis ART-Xtg29.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.3
  • Coverage: 270.0
  • Bit_score: 484
  • Evalue 1.10e-133
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23); K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] similarity KEGG
DB: KEGG
  • Identity: 84.8
  • Coverage: 270.0
  • Bit_score: 477
  • Evalue 2.30e-132
5-hydroxymethyluracil DNA glycosylase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003048058 similarity UNIREF
DB: UNIREF100
  • Identity: 86.7
  • Coverage: 270.0
  • Bit_score: 485
  • Evalue 3.50e-134

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Taxonomy

Xanthomonas translucens → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 813
ATGCCGGAACTGCCCGAAGTAGAAACCACCCGCCGCGGCCTGGAGCCACACCTGCAGGGGCGTCGCATCCACGGCGTGATCCTGCGCCGGCCGGACCTGCGCTGGCCGATTCCGCCGGACATCGAGCGGGCGCTGCCCGGCCAGCGCATCGCCGCGATCCGCCGCCGCGCCAAGTACCTGCTGCTCGATACCGATGCCGGCAGCGCGCTGCTGCACCTGGGCATGTCCGGCAGCCTGCGCGTGCTGCCCGGCGACACCCCGGTGCGTGCCCACGACCACGTCGACATCAGCCTCGAGGATGGGCGCCTGCTGCGCTTCAACGACCCGCGCCGGTTCGGTTGCCTGCTGTGGCAGCCGCCGGGCGAAACCCACGAACTGCTGCGCGGGCTCGGCCCCGAGCCGCTGGACGCGGCGTTCGACGGCGACTACCTGTTCGCACGCAGCCGCGGCCGCAGCGCACCGGTCAAGAGCTTCCTGATGGATCAGCGCATCGTCGTCGGCGTCGGCAACATCTACGCCGCCGAAAGCCTGTTCATGGCCGGGATCAACCCGCTGCGCGAGGCCGGCAAGGTGTCGCGCGAGCGCTACCAGCGCCTGGCCACGGCGGTGAAGGACATCCTCGGCCATGCCATCACCCGCGGCGGCACCACCCTGCGCGATTTCATCAGTCCCGACGGCGCCCCCGGCTACTTCGAGCAGGAGCTGTCGGTATACGGCCGCGAGGGCCAGGCCTGCGTGCGCTGCGGGCGCCCGCTGCGCCATGCCAGCATCGGCCAGCGCGCCAGCGTGTGGTGCGGCCACTGCCAGCGCTGA
PROTEIN sequence
Length: 271
MPELPEVETTRRGLEPHLQGRRIHGVILRRPDLRWPIPPDIERALPGQRIAAIRRRAKYLLLDTDAGSALLHLGMSGSLRVLPGDTPVRAHDHVDISLEDGRLLRFNDPRRFGCLLWQPPGETHELLRGLGPEPLDAAFDGDYLFARSRGRSAPVKSFLMDQRIVVGVGNIYAAESLFMAGINPLREAGKVSRERYQRLATAVKDILGHAITRGGTTLRDFISPDGAPGYFEQELSVYGREGQACVRCGRPLRHASIGQRASVWCGHCQR*