ggKbase home page

scnpilot_solids1_trim150_scaffold_283_curated_47

Organism: solids_Stenotrophomonas_1

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: 51000..51962

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D65DDD related cluster n=1 Tax=unknown RepID=UPI0003D65DDD similarity UNIREF
DB: UNIREF100
  • Identity: 70.3
  • Coverage: 303.0
  • Bit_score: 437
  • Evalue 1.00e-119
LysR family transcriptional regulator {ECO:0000313|EMBL:EXF46105.1}; TaxID=1439940 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. BAY1663.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.8
  • Coverage: 302.0
  • Bit_score: 448
  • Evalue 6.10e-123
FIG022886: Transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 70.0
  • Coverage: 303.0
  • Bit_score: 435
  • Evalue 1.20e-119

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas sp. BAY1663 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 963
ATGATCCAATCTCCTCCCCCCGCGGTCTCCGCCATGAGCCAACTGCCCGACCTGGAAGCCTGGGCCATCTTCGCCAGGGTCGCCGAGGCCGGCTCCTTCGCCCGTGCGGCCGAAGCGCTGGGGCTGTCGCAGGCCACCGTGTCCAAGGCCATCACCCGGCTCGAAGCGCGCATCGGCACCACCCTGTTCCACCGCACCTCGCGGCGCATGTCGCTGACCGATGCCGGCGCCGCGGCGCTGGAGCGCGCCGCGCGCATCCTCGACGAGGGCGAGGCGGTGGAGGCCGAGGTCGCCGACCGTTCGACCACGCTGCGCGGACTGGTGCGGGTGGCCGCGCCGATGTCGTTCGGCGTGGCGCAGCTGGCGCCGCTGCTACCCGCATTCATGCGCGCGCATCCGGACGTGGAACTGGACATCCAGCTCAGCGACGCGCAGGTGGACCTGGTGGCCGAGCGCTTCGACCTGGCGTTGCGCATTTCCACCCTGGCCGACTCCAGCCTGCGCGCGCGCCGCCTGTGCCAGGTGCGGATCCTGCTGGTCGGCGCGCCGGGCTACTTCACCGAACACGGCCGGCCGCAGCATCCGCGCGACCTGGCCGGCCACCGTGGCTTCCAGTACAGCTACACGCGCGGCGGCAACACCTGGCGCTTCCGCCATCCCCGCCACGGCGAGTACGCGCAGACCGTGCCGCGCCAGTTGCAGGCCAACAACGCCGAAGTGTTCGCCGCCGCACTGCGGGGCGGGCTCGGGCTCGCCCTGCAACCGGAGTTCATGGTCTGGGACGACCTGCGCGCCGGCCGCCTGGAAACGGCGATGGACGACTGGCAGGTGGAGCCGATCGCGCTGCACATCGTCACCCCGCCCGGCCTGCGCCGCCCGGCGCGCGTGCAGCGGCTGATCGACTACCTGGCCGCCGGGCTGGAACGTGCGCCGTGGGCGACGGGCGCGGGTGCAGGCCGTTAA
PROTEIN sequence
Length: 321
MIQSPPPAVSAMSQLPDLEAWAIFARVAEAGSFARAAEALGLSQATVSKAITRLEARIGTTLFHRTSRRMSLTDAGAAALERAARILDEGEAVEAEVADRSTTLRGLVRVAAPMSFGVAQLAPLLPAFMRAHPDVELDIQLSDAQVDLVAERFDLALRISTLADSSLRARRLCQVRILLVGAPGYFTEHGRPQHPRDLAGHRGFQYSYTRGGNTWRFRHPRHGEYAQTVPRQLQANNAEVFAAALRGGLGLALQPEFMVWDDLRAGRLETAMDDWQVEPIALHIVTPPGLRRPARVQRLIDYLAAGLERAPWATGAGAGR*