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scnpilot_solids1_trim150_scaffold_109_curated_73

Organism: solids_Stenotrophomonas_1

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: comp(93526..93795)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S20 n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E34145 similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 89.0
  • Bit_score: 166
  • Evalue 9.20e-39
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.8
  • Coverage: 89.0
  • Bit_score: 166
  • Evalue 2.20e-38
rpsT; 30S ribosomal protein S20; K02968 small subunit ribosomal protein S20 similarity KEGG
DB: KEGG
  • Identity: 96.6
  • Coverage: 89.0
  • Bit_score: 163
  • Evalue 2.50e-38

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Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 270
GTGGCCAATATCAAGTCCGCCAAGAAGCGCGCCAAGCAGACCGTTGTGCGCAACGCGCGTAACACGGCTCAGCGTTCGATGCTGCGCACCGCCGTCAAGAAGGTGATCAAGGCTCTGGATGCCAATGACGCCGCCGGCGCCGAGGCTGCCTTTGCTGTCGCCCAGCCGATTCTCGACCGTTTCAGCGCCCGTGGCCTGATCCACAAGAACAAGGCCGCCCGTCACAAGAGCCGCCTGACCGCCCGCATCAAGGCCCTCAAGGCCGCCTGA
PROTEIN sequence
Length: 90
VANIKSAKKRAKQTVVRNARNTAQRSMLRTAVKKVIKALDANDAAGAEAAFAVAQPILDRFSARGLIHKNKAARHKSRLTARIKALKAA*