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scnpilot_solids1_trim150_scaffold_393_curated_60

Organism: solids_Stenotrophomonas_1

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: 70769..72145

Top 3 Functional Annotations

Value Algorithm Source
dbpA; ATP-dependent RNA helicase DbpA; K05591 ATP-independent RNA helicase DbpA [EC:3.6.4.13] similarity KEGG
DB: KEGG
  • Identity: 83.4
  • Coverage: 458.0
  • Bit_score: 758
  • Evalue 1.50e-216
RNA helicase n=1 Tax=Xanthomonadaceae RepID=UPI00029A264E similarity UNIREF
DB: UNIREF100
  • Identity: 83.6
  • Coverage: 458.0
  • Bit_score: 759
  • Evalue 1.60e-216
ATP-dependent RNA helicase DbpA {ECO:0000313|EMBL:EZP43076.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.0
  • Coverage: 458.0
  • Bit_score: 759
  • Evalue 2.30e-216

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Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1377
ATGACCGATTTTTCCTCGTTGCCGCTGATCCCGGCCCTCGCACCCGGCATCGACGCGCTGGGCTACACCACCATGACGCCGGTGCAGGCGCTGGGCCTGCCGCCGATCCTGGAGGGACGCGACGTGATCGCCCAGGCCCCCACCGGCAGCGGCAAGACCGCCGCCTTCGGCCTGGGCCTGCTGAACCGGCTCGACCCGGCCACCATCCGTACCCAGGCGCTGGTGCTGTGCCCTACCCGCGAACTGGCCGACCAGGTCGGCAGGCAGCTGCGCAAACTGGCCACCGGCATCCCCAACCTCAAGCTGCTGGTACTGACCGGCGGCGTGCCGCTGGGCCCGCAGCTGGCCTCGCTGGAGGCGCACGACCCGCAGGTGGTGGTGGGCACGCCCGGCCGCGTGCAGGAACTGGCGCGCAAGCGCGCGCTCAACCTCGGCCAGGTGCGCAGCTTCGTCCTCGACGAGGCCGACCGCATGCTCGACATGGGCTTCGAGGAGCCCATCCGCGAGATCGCCGGGCGCACCCACAAGGAGCGGCAGAGCCTGCTGTTCTCGGCCACGTTCCCCGATGCCATCCGCGAACTGGCGCGCGCCCTGCTCAATGACCCGGTGGAAGTCACCATCGACGGCCAGCAGGAAGCCCCGGCGATCCAGCACCTGTTCTTCGAGGTCGAGCCGGCGCACCGGCAGAAGGCGCTCGCCGGGCTGCTGCTCAGGTACACGCCCGAATCGGCCGTGGTGTTCTGCAACACCCGCAAGGACGTGGACGAGGTGGCCAATTCGCTGCGCCAGTTCGGCTTCTCGGCGCTGGCCCTGCATGGCGACATGGAACAGCGCGACCGCGACGAGGTCCTGCTGCAGTTCGCCAACCGCAGCTGCAACGTACTGGTCGCCAGCGACGTGGCCGCGCGCGGCCTGGACGTGGAAGACCTGGCCGCGGTGGTCAACTACGAGATGCCCAGCGACCTGGACACCTACCGCCACCGCGTCGGCCGCACCGCCCGCGCCGGCCGCCGCGGCCTGGCGCTGAGCCTGGTCGCCGGCCGCGAGCGCCACCGCGCCGATGCGCTGGAAACCGACCAGGGCACCGCCCTGGACTGGCAGAAGACCCCGCTGGCCACCGCGCGCCCGGCACAGCTGCCGCAGGCGGCGATGACCACGCTGCGGATCGATGGCGGCAAGACCGACAAGCTGCGCGCCGGCGACATCCTCGGCGCGCTCACCGGTGATGCCGGGTTGTCGGCCAAGGCCATCGGCAAGATCGACATCTTCCCCACCCGCTCCTACGTGGCCATCGCCCGCGAGCAGGCCGGCAAGGCGATCGCGCGGCTGGAAGCCGGCAGGATCAAGGGCAAGCGCTTCCGCGTGCGCAGGATGTGA
PROTEIN sequence
Length: 459
MTDFSSLPLIPALAPGIDALGYTTMTPVQALGLPPILEGRDVIAQAPTGSGKTAAFGLGLLNRLDPATIRTQALVLCPTRELADQVGRQLRKLATGIPNLKLLVLTGGVPLGPQLASLEAHDPQVVVGTPGRVQELARKRALNLGQVRSFVLDEADRMLDMGFEEPIREIAGRTHKERQSLLFSATFPDAIRELARALLNDPVEVTIDGQQEAPAIQHLFFEVEPAHRQKALAGLLLRYTPESAVVFCNTRKDVDEVANSLRQFGFSALALHGDMEQRDRDEVLLQFANRSCNVLVASDVAARGLDVEDLAAVVNYEMPSDLDTYRHRVGRTARAGRRGLALSLVAGRERHRADALETDQGTALDWQKTPLATARPAQLPQAAMTTLRIDGGKTDKLRAGDILGALTGDAGLSAKAIGKIDIFPTRSYVAIAREQAGKAIARLEAGRIKGKRFRVRRM*