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scnpilot_solids1_trim150_scaffold_241_curated_7

Organism: solids_Stenotrophomonas_1

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: comp(6207..6623)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Pseudomonas fluorescens RepID=UPI0002F0B159 similarity UNIREF
DB: UNIREF100
  • Identity: 72.8
  • Coverage: 103.0
  • Bit_score: 166
  • Evalue 2.40e-38
Putative transmembrane protein {ECO:0000313|EMBL:EZP68067.1}; TaxID=1470593 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. RIT357.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.6
  • Coverage: 112.0
  • Bit_score: 165
  • Evalue 5.80e-38
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 71.7
  • Coverage: 106.0
  • Bit_score: 163
  • Evalue 3.80e-38

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Taxonomy

Pseudomonas sp. RIT357 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 417
ATGATGAACGAGGCTTTCGAGGGTGTCGTGGTCCAGCAAGGTGAAGGCGAATGTCGGCAGGAAGATTCCGGCAGCTGTCACCACGGCGCCCCAAGGGCCTGGCTGCTGATCGCGGTGGCCAGCGTAGGCAACGTACTCGGCTCGGTGATCAATTGGTGGTTGGGGCGGGGTCTGCTGCACTTTCGTGAGCGACGCTGGTTTCCGGTCTCGGCGCAGGCGCTGGAGCGCGCCCAGGCCCGCTACCAGCGTTTCGGCAGCTGGTCGCTGCTCTTGAGCTGGGTACCGATCATCGGCGATCCGCTGACCCTGGCCGCCGGGGTGATGAAAGAACCGCTGTGGCGGTTCCTGCTGCTGGTCACGCTGGCCAAGACCGGACGTTACCTGGTGCTGGCAGCGGTGACCTTGCAGCTGCTCTAG
PROTEIN sequence
Length: 139
MMNEAFEGVVVQQGEGECRQEDSGSCHHGAPRAWLLIAVASVGNVLGSVINWWLGRGLLHFRERRWFPVSAQALERAQARYQRFGSWSLLLSWVPIIGDPLTLAAGVMKEPLWRFLLLVTLAKTGRYLVLAAVTLQLL*