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scnpilot_solids1_trim150_scaffold_11402_curated_4

Organism: solids_Truepera_1

near complete RP 48 / 55 BSCG 46 / 51 ASCG 11 / 38 MC: 1
Location: comp(1744..3162)

Top 3 Functional Annotations

Value Algorithm Source
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] similarity KEGG
DB: KEGG
  • Identity: 76.4
  • Coverage: 471.0
  • Bit_score: 711
  • Evalue 2.20e-202
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; Flags: Precursor;; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.4
  • Coverage: 471.0
  • Bit_score: 711
  • Evalue 9.70e-202
Transcription-repair-coupling factor n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CXF7_TRURR similarity UNIREF
DB: UNIREF100
  • Identity: 76.4
  • Coverage: 471.0
  • Bit_score: 711
  • Evalue 6.90e-202

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Taxonomy

Truepera radiovictrix → Truepera → Deinococcales → Deinococci → Deinococcus-Thermus → Bacteria

Sequences

DNA sequence
Length: 1419
TTCGAGACGTTCCGCGAGCGCTTCGCTGGTCTGCCCGTCAGCATCGAGATGTTGTCGCGCTTCACGAGCGACGCGCAAGCGCGGGCGGCGCTCAAGGGCCTCAAGGAAGGCACCGTCGACATCGTGGTGGGCACGCATAGGCTGCTCAACGAGGCCATCGAGTACAAGAACCTTGGCCTGCTCATCGTTGACGAGGAGCACCGCTTCGGGGTCGGGCAGAAGGAACGCCTCAAGGGCCTCAAGGCGAACCTCGACGTGCTGTCGCTATCAGCCACGCCCATCCCGCGCACGCTTTACATGAGCTTGGTCGGCTTGCGCGACGTGTCGCAGATCATGACGCCGCCGCAGGGCCGCAAACCCATCCAGACCGTGCTGCAACCGTACGACCCGCTGGTGGTGCGCCAGGCGGTGCTGTTCGAGCTGGAGCGCGGTGGCAAGGTCTTCTACATCCACGACCGTATCGGCTCCATCGGCCTTCGAGCTCGCACACTCGGGCAACTCGTGCCCGAGGCACGCGTCGGTGTGGCGCACGGGCAGATGGGGGAGGCCGAACTCGAGGAGATCATCCTCGGCTTCGAGGAGGGCGCGTACGACGTGCTCCTCTCGACCACCATCGTCGAGTCGGGCCTAGACATCGCTGGCGCCAACACGCTGCTCATCGAACGTGCCGACCGCCTCGGCCTGGCGCAGCTCTACCAGTTGCGCGGACGCGTCGGCAGGCGCGAGACGGAAGCGTGGGCATACATGCTCTACCCTGGCAGGTTGACGGAGCAGGCGCAACGCAGGCTTTACGCCATCGCGGAGCTGAACGACCTTGGCTCCGGTCACTTGCTAGCCGAGAAGGACATGGAGATCCGCGGCGTTGGCAACCTCTTGGGGCCAGAGCAGCACGGCAACATCAGCGCGGTGTCGCTCGCGGTCTACACGGAGATGCTGGCCGAAGAGGTGGCCAAGCTCAAGGGCGAGCTGCGCGCGGCCGAGGTGCCGCAAGTGACGGTCGATCTCTCGTTGGACGCGCGCCTGAGCCCCACTTACATTCAAGACGACGCCGTGCGCATCAACTACTACGGCCGGCTAGCAGCCACCGCCAGCTTGGCTGAGGTCAACCGCATAGCCAAGGAGATGCGCGAGGCGTACGGACCGTTCTCGCCCGAGGTGAGGGCGTTCGTCGAGCTGACGCGCCTGCGCCTGCTGGCTGGCGCGAAGGGCGTCGCGACCATCAAGGAGCACATGACGGACGTGCAGGTTTCGATGCGCGATGACCTCGAGTCGCTCGATTACGACGCCAAGCGCCTGAAGGCCCTGCCGTTTCAGGTCGAGCCGACGCGCTACCCGCCCGGCTTCAGCGTCAAGAAACGTGGGTTGAAGGACGTGGAGGTGCCCGCGGCCCTCATGGAGTTGCTCTACCTGGTCGGCTAA
PROTEIN sequence
Length: 473
FETFRERFAGLPVSIEMLSRFTSDAQARAALKGLKEGTVDIVVGTHRLLNEAIEYKNLGLLIVDEEHRFGVGQKERLKGLKANLDVLSLSATPIPRTLYMSLVGLRDVSQIMTPPQGRKPIQTVLQPYDPLVVRQAVLFELERGGKVFYIHDRIGSIGLRARTLGQLVPEARVGVAHGQMGEAELEEIILGFEEGAYDVLLSTTIVESGLDIAGANTLLIERADRLGLAQLYQLRGRVGRRETEAWAYMLYPGRLTEQAQRRLYAIAELNDLGSGHLLAEKDMEIRGVGNLLGPEQHGNISAVSLAVYTEMLAEEVAKLKGELRAAEVPQVTVDLSLDARLSPTYIQDDAVRINYYGRLAATASLAEVNRIAKEMREAYGPFSPEVRAFVELTRLRLLAGAKGVATIKEHMTDVQVSMRDDLESLDYDAKRLKALPFQVEPTRYPPGFSVKKRGLKDVEVPAALMELLYLVG*