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scnpilot_solids1_trim150_scaffold_3974_curated_5

Organism: solids_Truepera_1

near complete RP 48 / 55 BSCG 46 / 51 ASCG 11 / 38 MC: 1
Location: comp(4186..4965)

Top 3 Functional Annotations

Value Algorithm Source
shikimate 5-dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25] similarity KEGG
DB: KEGG
  • Identity: 43.8
  • Coverage: 260.0
  • Bit_score: 185
  • Evalue 1.70e-44
Shikimate 5-dehydrogenase n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CYC0_TRURR similarity UNIREF
DB: UNIREF100
  • Identity: 43.8
  • Coverage: 260.0
  • Bit_score: 185
  • Evalue 5.50e-44
Shikimate 5-dehydrogenase {ECO:0000313|EMBL:ADI14759.1}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.8
  • Coverage: 260.0
  • Bit_score: 185
  • Evalue 7.80e-44

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Taxonomy

Truepera radiovictrix → Truepera → Deinococcales → Deinococci → Deinococcus-Thermus → Bacteria

Sequences

DNA sequence
Length: 780
ATGCATTTAGTGGCGCTCGTCACGGAAGACTCCAACCTCAAGCACGGACTACGTGACTTCCGCGACGAATCCGGCCGCTTCCTCATCCACGCCGTACCAGACGGCTCGATGAGCGACCTCGTGCGCGCGTTGCAGCGACTCGATTTCGCCGGCGCCGTGATACTCGACGAGGCGCGCCAGGCCGAGGCTAAGTCGGTCGCGGCGCGCGCGTCGCTCGACGCATCGGACTTAGGCGTGGCCGACACGCTTACCGTCACGCAAGCCGGGGTTATGGCAGACCACACCTTCGGTCGGGCGCTCAGCACCATGCTCGGTGCGCGGCGCTGGCACGCTGACGGTGCGCACGCCGTCATCTTGGGCGCTGGACCGGACGCTCGCGCCGCCGCACGCGAGTTCGCGCGCCTAGGCGTCGCGTCTCTCGCGATCCTCGCTAGCGACCGGGTAACCGCCGAACGCGCCAAGCCGGAAGCGGCTGGCACGACCGTGTACGCGCGCTCCTTAACCGACCCGCTCGGCAACACGCTGCTCGCACGCGCCGACCTCGTGCTGCGCCTCGACAAGAACGCGCGAGTCGACGACAGCCTCCTCGGGCCGCACCTCACGGTCATAGACCTCATAGATACGAACGTGTCTGACCTGCGCAGCCGCGCCATCGCAGTCGGCGCTCTCACGTTCAATCGTCGAGACGTCGAGGCACACCGCTTCGAGCTCGCGCTCAGCCAGATCCTCGGCGGCACCGTCGGCTTGGAGCCGCTCCTCACCCTGTTCCACGGGCTGTGA
PROTEIN sequence
Length: 260
MHLVALVTEDSNLKHGLRDFRDESGRFLIHAVPDGSMSDLVRALQRLDFAGAVILDEARQAEAKSVAARASLDASDLGVADTLTVTQAGVMADHTFGRALSTMLGARRWHADGAHAVILGAGPDARAAAREFARLGVASLAILASDRVTAERAKPEAAGTTVYARSLTDPLGNTLLARADLVLRLDKNARVDDSLLGPHLTVIDLIDTNVSDLRSRAIAVGALTFNRRDVEAHRFELALSQILGGTVGLEPLLTLFHGL*