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scnpilot_solids1_trim150_scaffold_40889_curated_3

Organism: solids_Truepera_1

near complete RP 48 / 55 BSCG 46 / 51 ASCG 11 / 38 MC: 1
Location: comp(2431..3582)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase D TruD; K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 350.0
  • Bit_score: 407
  • Evalue 5.40e-111
tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseudouridylate synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA-uridine isomerase D {ECO:0000256|HAMAP-Rule:MF_01082}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.4
  • Coverage: 350.0
  • Bit_score: 407
  • Evalue 2.40e-110
tRNA pseudouridine synthase D n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CUC5_TRURR similarity UNIREF
DB: UNIREF100
  • Identity: 59.4
  • Coverage: 350.0
  • Bit_score: 407
  • Evalue 1.70e-110

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Taxonomy

Truepera radiovictrix → Truepera → Deinococcales → Deinococci → Deinococcus-Thermus → Bacteria

Sequences

DNA sequence
Length: 1152
GTGACGACTGACCAAGCGCCGCCAACGGTGATCCACGAAGAGCAGGGGAGCCCACAGCCGGACCCAGACCTTGAGCGGCAGCGGTTCACGTTCCGCTGGAGCGAGCTGCCGCTCGTCACGCCTGACCTGCTTGGTAGTGGCGGCAGTATCCGCTCCGTGCCGGAGGACTTCCGCGTAACCGAACTGCCCGCGTACCTGCCGGAAGGCAGCGGCTCACACCGTTACCTCCTCGTCGAGAAGAGCGGTTACACCACCCGCGACCTGCTACTGGCGTTGCAGCGCGCAGGCGTCGAACCTAACGCCATCGGCGTGGCCGGCCTGAAGGACAAGGCGGCCGTTACCGTGCAGTGGCTGTCGCTACCCAAGCGCTACTCCGAGGCCGTGAACGAGCTGATGGCCATGCCGGGCGTGCGCGTTCTCGATGAGAGCTACCACCGCAACAAGCTCGGCATCGGCCACCTGCGTGGTAACCGCTTCGAGATCACCATCCAAGGCGTCGGGCATGAAGCGCGCGAGCGCGCGGTGGCGGCGTTCGACGCGCTCGCGCAGCGCGGCTCACCGAACTGGTTCGGTCCCCAGCGCTTCGGACGCTTCGGGAGCAACGCTTACGACGGCCTTCGCGTAGTTCGCGGTGAACGCGTTCCGGGCGGCCATCACCTCAAGCGCTTCTTCGTGTCGGCGCTGCAGTCGCTCTTGTTCAACGCCATGCTCGCCGAACGCTGCGAGCGCGGCTGGTACCAGGCGGTAGTCGAGGGGGATTGGGCGCGTAAGCACGCAACGGGCGGCACGTTCCTCGTCGAGGACGCCGCCGTCGAGTCGCCGCGGGCGTTGGCGCTGGAGATCAGCGCAACGCTTCCGCTTCACGGCCGCAAGGTGAAGCCGACGACGGGCTTGGCTGGCGCTGTCGAAGCGCTCGTCTTGGCGCACTACGACCTGCGCTGGGCGCAGTTCGGTTCGAGGCGCGGCGATCGCCGCCCAACGCGCGTGCTGCTGGACAACACGACCGTCGCGCAAGCAGGCAGCGCCCTCACGGTCGGGTTCGACCTGCCGAAAGGCGCCTACGCCACCGCCGTGCTGCGCGAGGTCATGAAGGTCGACGTGGATGCGCCCTTCGAGTCGCCACAAGGCGCCGCTGTCGACGACGAGGAGTAG
PROTEIN sequence
Length: 384
VTTDQAPPTVIHEEQGSPQPDPDLERQRFTFRWSELPLVTPDLLGSGGSIRSVPEDFRVTELPAYLPEGSGSHRYLLVEKSGYTTRDLLLALQRAGVEPNAIGVAGLKDKAAVTVQWLSLPKRYSEAVNELMAMPGVRVLDESYHRNKLGIGHLRGNRFEITIQGVGHEARERAVAAFDALAQRGSPNWFGPQRFGRFGSNAYDGLRVVRGERVPGGHHLKRFFVSALQSLLFNAMLAERCERGWYQAVVEGDWARKHATGGTFLVEDAAVESPRALALEISATLPLHGRKVKPTTGLAGAVEALVLAHYDLRWAQFGSRRGDRRPTRVLLDNTTVAQAGSALTVGFDLPKGAYATAVLREVMKVDVDAPFESPQGAAVDDEE*