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scnpilot_solids1_trim150_scaffold_1590_curated_11

Organism: solids_Xanthomonadales_2

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: comp(8992..9666)

Top 3 Functional Annotations

Value Algorithm Source
Membrane protein {ECO:0000313|EMBL:KGM51912.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.9
  • Coverage: 213.0
  • Bit_score: 351
  • Evalue 1.20e-93
Putative uncharacterized protein id=3022305 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 71.8
  • Coverage: 213.0
  • Bit_score: 320
  • Evalue 1.20e-84
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 75.4
  • Coverage: 207.0
  • Bit_score: 313
  • Evalue 6.30e-83

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Taxonomy

Lysobacter concretionis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 675
ATGTCCGCATCTCCTTCGCTCGGCCTGCGCCTGCAGCGCCTGTTCCTGACCGGTCTGCTGACCCTGCTGCCGCTGTGGCTGACCTGGGTGGTGGTGAAATTCGTGTTCGTGCTGCTGGGCGACCTCAGCAAGCCGCTGATCGAGCCCGGCCTTGCCGGCATCGCCGCGGGCAACCCCCGGACCTTCGGCTGGCTGGTGGAACCGTGGGTGCAGAACGCGATCGCGCTGGTCGCCACGGTGGGCTTCATCCTGCTGGCCGGCTGGCTGGCGCGGCGGGTGGTGGGACAACGCCTCCTTCGCTGGTTCGAGGCCCTGGTGGCGCGTATCCCGTTGGCCAACACCATCTATGGCAGCGCGCGCAAGCTGCTGGACATCCTGCAGACCAAACCCGATGGCACCCAACGGGTGGTGCTGATCGACTTTCCGCACAACGAGATGAAAACGCTCGGCTTCGTCACCCGGGTGATGCGCGAGATCGGTACTGGCCGCGAACTGGCGGCGGTGTACGTGCCGACCACGCCCAATCCGACCTCGGGCTACCTCGAGATCGTGCCGATGGAGAAGATCACCCCGACCGACTGGACGGTTGACCAGGCGATGAGCTTCATCATCAGCGGCGGCGCGGTGGCGCCGGACACCATCCCGTTCGCGCCGCCGCCGGCCAAGTCGCCCTGA
PROTEIN sequence
Length: 225
MSASPSLGLRLQRLFLTGLLTLLPLWLTWVVVKFVFVLLGDLSKPLIEPGLAGIAAGNPRTFGWLVEPWVQNAIALVATVGFILLAGWLARRVVGQRLLRWFEALVARIPLANTIYGSARKLLDILQTKPDGTQRVVLIDFPHNEMKTLGFVTRVMREIGTGRELAAVYVPTTPNPTSGYLEIVPMEKITPTDWTVDQAMSFIISGGAVAPDTIPFAPPPAKSP*