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scnpilot_solids1_trim150_scaffold_2577_curated_2

Organism: solids_Xanthomonadales_2

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: 525..1856

Top 3 Functional Annotations

Value Algorithm Source
TolC family type I secretion outer membrane protein n=3 Tax=Stenotrophomonas maltophilia RepID=J7V918_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 59.4
  • Coverage: 443.0
  • Bit_score: 477
  • Evalue 1.20e-131
Membrane protein {ECO:0000313|EMBL:KGM54458.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.0
  • Coverage: 469.0
  • Bit_score: 506
  • Evalue 4.40e-140
tolC; putative outer membrane protein; K12340 outer membrane channel protein similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 443.0
  • Bit_score: 477
  • Evalue 3.80e-132

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Taxonomy

Lysobacter arseniciresistens → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1332
ATGTCGCGTCGCCCGCTCGCCCTCGCCCTTGCCCTCGTCCTGCTGCCGGCCGCGGCGCAGGCAGACGACCTGCTGCAGAGCTACCAGAACGCGCGCAGCAGCGACCCCCAGTACGCCGCCGCGGAATCCACTCGCGCCGTCGCCGCCGAGCGGCCGGTGCAGGCCCGCGCCAACCTGCTGCCGGGCATCGGCGGCTCCGTGAGCAGCAACCGGGTCGATCGCGGCAACGGCGATTCCAGCAATGGCAGCTGGGGCCTCAGCCTCAACCAGTCGTTGTTCAACTTCGGCAACTACACCGCCCTGCAGGGCGCCAAGGCGCAGGACCGCGCCGGCGGCTACAACCTGGAAGCCGCGGGCCAGAACCTGATCACCCGCACCTCCGCCGCCTACTTCAACGTGCTGGTCCAGCTGGAAACGCTGGCCGCCGCGGAAGCCGCGGAAGCCGCGCTGAAGAAACAGTTCGATTTCGCCAGCAAGCGCCTGGAAGTGGGCCTGGCGCCGATCACCGACGTGCACGAAGCCCGCGCCCAGTACGACGGCGCGCGCGCCAGCACCATCCTCGCCCGCAACGCGGTGCGCGATGCCTACCAGGCGCTGGTGGAAATCACCGGCGCCCCGGTCGCCAACCTCAAGGGCCTGCCGGATGACTTCAAGCCGGCGCTGCCCGCGGAGAAGGGCGTCGAGGCTTTCGTCGGCGACGCGTTGTCCAACAACCCCTCGCTGAAGGCGCAGGAAGCCAACCTGGAAGTGGCCCAGGCCGGCGTCAAGACCGCGCGCGCCGGCCACTACCCCACGCTCGGCCTGCAGGCGACCTATGGCAAGGCGATCCCCGGCCTGTACGACAACCCGGCCTTCATTGGTGAGAACAAGGCCAATACCAGCGTCGGCGTGACCCTGAACATCCCGATCTTCGCCGGCGGCGCCACCCAGTCCGGCGTGCGCACCGCGCTGGCCCAGCGCGACGGCGCCGCCGACGCGGTGGAGCAGAGCCGCCGCGCGATCGAGCGCAGCACCCGCGGCGCCTATCAGGCGGTGGTGGCGGGCATCAGCGAAGTGGAAGCGCGCCGGCTGGCGCTGGTGTCCGCGCAGAGCGCCTACGACGCCTCGCAGGTCGGCCTGGAAGTCGGCACGCGCACCGTGCTGGACGTGCTGAACAACCAGCGCACCCTGTTCTCCGCGCAGCAGGCCTATGCCCAGGCCAAGTACAACTTCCTGCAGAGCCGGCTGCTGCTGGAACAGTCGGCCGGCACGCTGGACGTCTCCGACGTCGAGGACATCAACCGCCTGCTGACCACCGACAAGGCCCTCGACCAGACCTTGGCGGCGCGCTGA
PROTEIN sequence
Length: 444
MSRRPLALALALVLLPAAAQADDLLQSYQNARSSDPQYAAAESTRAVAAERPVQARANLLPGIGGSVSSNRVDRGNGDSSNGSWGLSLNQSLFNFGNYTALQGAKAQDRAGGYNLEAAGQNLITRTSAAYFNVLVQLETLAAAEAAEAALKKQFDFASKRLEVGLAPITDVHEARAQYDGARASTILARNAVRDAYQALVEITGAPVANLKGLPDDFKPALPAEKGVEAFVGDALSNNPSLKAQEANLEVAQAGVKTARAGHYPTLGLQATYGKAIPGLYDNPAFIGENKANTSVGVTLNIPIFAGGATQSGVRTALAQRDGAADAVEQSRRAIERSTRGAYQAVVAGISEVEARRLALVSAQSAYDASQVGLEVGTRTVLDVLNNQRTLFSAQQAYAQAKYNFLQSRLLLEQSAGTLDVSDVEDINRLLTTDKALDQTLAAR*