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scnpilot_solids1_trim150_scaffold_2270_curated_2

Organism: solids_Xanthomonadales_2

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: comp(653..1834)

Top 3 Functional Annotations

Value Algorithm Source
3-methylitaconate isomerase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002E239CE similarity UNIREF
DB: UNIREF100
  • Identity: 82.1
  • Coverage: 391.0
  • Bit_score: 637
  • Evalue 8.10e-180
3-methylitaconate isomerase {ECO:0000313|EMBL:AHY58112.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.5
  • Coverage: 394.0
  • Bit_score: 641
  • Evalue 7.80e-181
AcnD-accessory protein PrpF; K09788 hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 80.4
  • Coverage: 393.0
  • Bit_score: 633
  • Evalue 4.80e-179

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Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1182
ATGTCATCGCTTCCGCAACTGCGCATCCCCGCCACCTACATGCGCGGCGGCACGTCCAAGGGCGTGTTCTTCAGGCGCGACGACCTGCCGGAAGCCGCGCAGGTGCCCGGCCCGGCGCGCGACGCGCTGCTGCTGCGGGTGATCGGCTCGCCCGATCCCTACGGCAAGCACACCGACGGCATGGGCGGGGCGACCTCCTCGACGTCCAAGTGCGTGATCATCGCGCCGGCGTCCGTGCCGGATCACGACGTCGATTATCTCTACGGGCAGGTCAGCATCGACACCGCCTTCGTGGACTGGTCCGGCAACTGCGGCAACCTGTCCACCGCGGTCGGCCCGTTCGCGATCGCCAACGGCTTCCTTCCCGCCGCACGCATCCCGCAAGACGGCACGGTGACGGTGCGGATCTGGCAGGCCAACATCGGCAAGACCATCCTTGCGCACGTGCCGGTGCGCAATGGCCAGGTGCAGGAAACCGGCGATTTCGAAGTGGATGGGGTGACGTTTCCGGCCGCTGAAATCGTGCTGGAATTCCTGGATCCTTCCGACGATGACGGTGCGGGTGGATCGATGTTCCCCACCGGGAACCTGGTCGATGACCTCGAGGTGCCCGGCGTCGGCGCGCTCAAGGCCACGCTGATCACCGCCGGCATCCCCACCGTGTTCGTCAACGCCGCCGACATCGGCTACGACGGCAACGAACTGCAGCCCGCCATCAACGAAGACAAGGCCGCGCTGGCGAAGCTGGAAGCGATCCGCATTGCCGGCGCGCTGCGCATGGGCCTGATCAAGACGGCCGAAGAGGCGGCCACGCGCCAGCACACGCCGAAGGTCGCGCTGGTCGCGCCGCCCAAGGCCTACGTATCCTCCAGCGGCAAGCGCATCGAAGCCGGCGCCATCGATCTCAACGTGCGCGCGATGTCGATGGGCAAGCTGCACCACGCGATGATGGGCACCGCCTCGGTCGCCATCGCCACCGCGGCGGCAGTGCCGGGCACGCTGGTGAACATCGCCGCAGGCGGCGGCACCCGCGAACGCGTCTGCTTCGGCCACCCGTCCGGCACGCTGGCGGTAGGCGCCTCCGTCGAACAGGTCGATGGCCAGTGGGAGGTGACGCGCGCCGTGATGAGCCGCAGCGCGCGGGTGCTGATGGAAGGCTGGGTGCGGGTGCCGCAGGACTGA
PROTEIN sequence
Length: 394
MSSLPQLRIPATYMRGGTSKGVFFRRDDLPEAAQVPGPARDALLLRVIGSPDPYGKHTDGMGGATSSTSKCVIIAPASVPDHDVDYLYGQVSIDTAFVDWSGNCGNLSTAVGPFAIANGFLPAARIPQDGTVTVRIWQANIGKTILAHVPVRNGQVQETGDFEVDGVTFPAAEIVLEFLDPSDDDGAGGSMFPTGNLVDDLEVPGVGALKATLITAGIPTVFVNAADIGYDGNELQPAINEDKAALAKLEAIRIAGALRMGLIKTAEEAATRQHTPKVALVAPPKAYVSSSGKRIEAGAIDLNVRAMSMGKLHHAMMGTASVAIATAAAVPGTLVNIAAGGGTRERVCFGHPSGTLAVGASVEQVDGQWEVTRAVMSRSARVLMEGWVRVPQD*