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scnpilot_solids1_trim150_scaffold_3256_curated_5

Organism: solids_Xanthomonadales_2

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: 2541..3311

Top 3 Functional Annotations

Value Algorithm Source
3-hydroxy-2-methylbutyryl-CoA dehydrogenase {ECO:0000313|EMBL:KGM54822.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.3
  • Coverage: 256.0
  • Bit_score: 448
  • Evalue 8.30e-123
3-hydroxyacyl-CoA dehydrogenase id=2555813 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 79.8
  • Coverage: 257.0
  • Bit_score: 407
  • Evalue 8.90e-111
short-chain dehydrogenase/reductase SDR similarity KEGG
DB: KEGG
  • Identity: 81.2
  • Coverage: 256.0
  • Bit_score: 404
  • Evalue 3.10e-110

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Taxonomy

Lysobacter daejeonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 771
ATGCAGCTTGCATCCGCCCGCGCCGTCATCACCGGCGGCGTTTCCGGCCTCGGTTTCGCCGTGGCCCGGCACCTCGTTGCCCACGGCGGCAAGGTCGCCCTGTTCGACGTCAACGAAGACAAGGGCGCGGCTGCCGTGGCCGAGCTGGGCGAAGCCAATGCCCGCTTCTTCAAGACCGACGTCAGCAACGAGGAACAGGTAGCCGCCAACGTCGCTGCCGCCAGGGATTTCCTGGGCGGCCTGAACACGGCCGTCAACTGCGCCGGCATCCTCGGCGCCGGCCGGGTGCTGGGCAAGACCGGGCCGATGACGCTGTCGCATTTCTCCACCACCGTGATGGTGAACCTGGTCGGCAGCTTCAACGTGGCCAAGGCCTGCGCCGACCTGATGCAGCACAACGAAGCGAACGCCGACGGCGAGCGCGGCGTGATCGTCAACACCGCCTCGGTGGCCGCCTATGAGGGCCAGATCGGCCAGGCCGCCTACTCCGCCTCGAAGGGCGGCGTGGTCGGCATGACCCTGCCGATGGCGCGCGAACTGGCCCGCTTCGGCATACGAGTGATGACCGTGGCGCCGGGCGTGTTCTGGACGCCGATGGTCGACGGCATGCCGGAGGACGTGCAGAAGTCGCTGGCCGCCACCATCCCGTTCCCGTCGCGCCTGGGCCAGCCGCAGGAGTACGCCGACCTGGTGGCCTACATCCTCACCAACACCTATCTCAACGGCGAAACCATCCGCCTCGACGGTGCCACCCGGCTGGCGCCGAAGTGA
PROTEIN sequence
Length: 257
MQLASARAVITGGVSGLGFAVARHLVAHGGKVALFDVNEDKGAAAVAELGEANARFFKTDVSNEEQVAANVAAARDFLGGLNTAVNCAGILGAGRVLGKTGPMTLSHFSTTVMVNLVGSFNVAKACADLMQHNEANADGERGVIVNTASVAAYEGQIGQAAYSASKGGVVGMTLPMARELARFGIRVMTVAPGVFWTPMVDGMPEDVQKSLAATIPFPSRLGQPQEYADLVAYILTNTYLNGETIRLDGATRLAPK*