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scnpilot_solids2_trim150_scaffold_203_curated_12

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: 10996..12750

Top 3 Functional Annotations

Value Algorithm Source
Sigma 54 interacting domain protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XG63_NAKMY similarity UNIREF
DB: UNIREF100
  • Identity: 51.3
  • Coverage: 558.0
  • Bit_score: 492
  • Evalue 4.80e-136
sigma 54 interacting domain-containing protein; K16012 ATP-binding cassette, subfamily C, bacterial CydC similarity KEGG
DB: KEGG
  • Identity: 51.3
  • Coverage: 558.0
  • Bit_score: 492
  • Evalue 1.50e-136
Sigma 54 interacting domain protein {ECO:0000313|EMBL:ACV80065.1}; Flags: Precursor;; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.3
  • Coverage: 558.0
  • Bit_score: 492
  • Evalue 6.70e-136

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Taxonomy

Nakamurella multipartita → Nakamurella → Nakamurellales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1755
GTGACGCGACCGGCAAGCCCGGCCGGAGCGCTGCGGGAAGCGGCCCGGCCGGTTCGCCTGCGGATGGCTGGCGCCGTGCTGGCCGCGGCCGCGGCGTTGACCTGCGGGGTGGCGCTGATGGCGACCTCCGCCTGGCTGATCGCTCGGGCAGCAGCCCACCCACCAGTGCTGACCCTGATGGTCGCGGTGGTGGCGGTGCGCGCGTTCGGCCTCGGCCGCGCGGTGCTGCGCTATGTGGAGCGGATCGTCGCCCACGAGGCTGCGTTTCGGATGCTCGCGGCGTTGCGAGGGCGAATCGTCTCGGCGCTGGTGCGCTGGGGTGAGCGGGGCCGGCTGTGGAGGCGGTCCGACCTGTTGGCGCGGACCGTGGACGACGTCCAGGACACCCAGTTCCTGCTACTGCGCGGAATTCTGCCGCTGGCAGCCGCCGTCGTGGTGGGCTCAGCTGCGGTCGTGCTGGCCATCGCCTTGCTACCGGCTGCCGGGCTGGTCCTGGCCGGCAGCCTGATCGCCGGCGTCGTAGTCACTCCGCTGGTGCTCGCGCGCCGGGCCGCCGCTGTCGAACAGTCCTCGGTGACGCTGCGGGCCCAGCGCACGGAGCTGGTGGCGCAGACCGTGGAGCAGCTCACCGACCTGGTCGCGTTGGGCGCCTTCGACCAGGCGCTGGACCGGTTGTCCGAGATCGACGATCGGCAGCGCTGCAACCGGCGCGCCGCGGCTCGCCTTGCCGGCATCGCGGCGGCAGTCGGCACCGCCGTCACCGGGATCGCCGCCGTGACAGCGCTACTCGTTGGCGTGCCGGCGGTGCGGGCGGATGACCTCACCGGGCCGGCACTCGCGGTGCTCGTGTTGACTCCGCTCGCGCTCAGCGAGGCGGTCACCGCCGCGGGGGGCGCCAGGGAGGCGATCGCCCGGACCGCCGCCGCCGCGGCCAGGGTGGCCGCCATGGTGACCACCGACAGCGAGCCGGAGGCGGACGGTCCGCGCATTCCAGCGACGCAGCCCTCTCCGGGCTGGCGGGCTGGCGGTCCACTGATCGCGCTAGAAGGGGTCAGCGCTCGGTGGCCCGGGGCCGCCGTGGACGCGCTGCAGGATGTGCACCTGGAGCTGCGCCCCGGTTTACGGCTAGGAGTGTTCGGCGACTCCGGTTCCGGCAAGTCGACGCTGGCTGCCGTGCTGCTCGGTCTGCTGCCGACCTCCTCGGGCCGGATCACCATCGACGGCCGCAAGGTCAACGTCGACCAACTGCGAGAAGGCGCGCTGGTGTCCTGGGTGGACCAGCGCGCGCACGTGTTCGCCACGTCGATTGCGGAGAACATTCGTCTGGCCCGCCCGGCGGCCTCGGACGGTGAGGTGCTGGCCGCGGCGCGGTCGGCGGGCCTCTGGCCATGGCTGGCCGAGTTGCCGCGCGGGCTGGCCACCCCGGTCGGAGAGCGCGGACAGGCGGTCTCCGGTGGGCAGCGTCAGCGAATCGCGCTGGCCCGCGCACTGCTGGCCGACCGGCCGGTCCTGATCGCCGACGAGGTGACCGCACACCTGGATCCCGCCGCCGCGGATCAGATCACCGCCGACCTGCTGGCTGACCGCCGCCGGTGCACGGTGCTGCTCACCCATCGTGAGCACGACGCCAACCTCGTCGACCAGGTGCTCCGGCTCGGCACCGGTCACCGCGGCCAATGCCGGCCGTCCCGTCCGCCACCGCCCCGGAGTGTCAGCCTGTGCGAGAGTAGCCGGCCGGACTCGCCGCACCGGTGA
PROTEIN sequence
Length: 585
VTRPASPAGALREAARPVRLRMAGAVLAAAAALTCGVALMATSAWLIARAAAHPPVLTLMVAVVAVRAFGLGRAVLRYVERIVAHEAAFRMLAALRGRIVSALVRWGERGRLWRRSDLLARTVDDVQDTQFLLLRGILPLAAAVVVGSAAVVLAIALLPAAGLVLAGSLIAGVVVTPLVLARRAAAVEQSSVTLRAQRTELVAQTVEQLTDLVALGAFDQALDRLSEIDDRQRCNRRAAARLAGIAAAVGTAVTGIAAVTALLVGVPAVRADDLTGPALAVLVLTPLALSEAVTAAGGAREAIARTAAAAARVAAMVTTDSEPEADGPRIPATQPSPGWRAGGPLIALEGVSARWPGAAVDALQDVHLELRPGLRLGVFGDSGSGKSTLAAVLLGLLPTSSGRITIDGRKVNVDQLREGALVSWVDQRAHVFATSIAENIRLARPAASDGEVLAAARSAGLWPWLAELPRGLATPVGERGQAVSGGQRQRIALARALLADRPVLIADEVTAHLDPAAADQITADLLADRRRCTVLLTHREHDANLVDQVLRLGTGHRGQCRPSRPPPPRSVSLCESSRPDSPHR*