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scnpilot_solids2_trim150_scaffold_163_curated_2

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: comp(2594..3532)

Top 3 Functional Annotations

Value Algorithm Source
23S RNA-specific pseudouridylate synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] similarity KEGG
DB: KEGG
  • Identity: 60.1
  • Coverage: 306.0
  • Bit_score: 341
  • Evalue 3.90e-91
Pseudouridine synthase n=1 Tax=Mycobacterium colombiense CECT 3035 RepID=J4JV45_9MYCO similarity UNIREF
DB: UNIREF100
  • Identity: 62.4
  • Coverage: 303.0
  • Bit_score: 345
  • Evalue 6.60e-92
RNA pseudouridine synthase family protein {ECO:0000313|EMBL:EJO88397.1}; TaxID=1041522 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium colombiense CECT 3035.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.4
  • Coverage: 303.0
  • Bit_score: 345
  • Evalue 9.20e-92

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Taxonomy

Mycobacterium colombiense → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 939
ATGAGCTCGCGCGGGGATCCACCGCTGCCGGCCGTCGACGGGGTACCTGCGGCTCGGCTACACCTGCCGCGCGGCGGGGCATGGTCGACGGTGGCGGAATTCCTGCTGGACCGGACCCGCAAGGCACCCGGTGTGCAGCGGCGGATCGACGCGGGCGAGGTGCTGCTGGGCGACGGCAGCGTGGTCCGGCCGGGCACGCCCTACGTGCCGGGCGGGTGGGTATACCTGTATCGCGACCTGCCCGACGAAGCACCGGTTCCGGGCGAGATCACCGTGCTGCACGCGGATTCCGACATCGTGGTGGTGGACAAGCCGCATTTCCTGGCAACGATGCCACGGGGCAGGCATGTGGTGCAGACGGTCGTGGTGCGGCTGCGCCGGGAGCTGGGTCTGCCGGAGCTGGCGCCGGCGCACCGACTGGACCGGCTGACCGCGGGGGTGCTGCTGCTCACGGCGCGGCGAGAGATCCGGGGCGCCTACCAGGAACTGTTCGCCCGACGTGAGGTCGCCAAGACCTACCTGGCGCTTGCCTCGGTCCGCGCCGACCTGGCGCTGCCCACCGAGGTGCGCTCACGGATCGTCAAGCCCCGCGGGTCCCTGCAGGCCATCGAGGTTCCCGGTGAACCGAATGCCGTCACGCGGGTGGAACTGGCTGGGGCGCCCGGTGTTGCCAGTGCCGCGAATGGCCGGGGCAACGGTGCCGCGCTCTACCGGCTGACCCCGTCCACCGGGCGCACGCACCAGCTCCGGGTGCACCTGGCCGGTCTGGGCATCCCGATCGTGAACGACCCGCTGTACCCGGTGGTGCTGGACCGGGAGCCGGGCGATTTCACCCGGCCGTTGCGGCTGCTGGCGCACCGGCTGGAGTTCACCGACCCGCTGTCCGGAGAGCGTCGCAGCTTCGCCTCCCGGCGAGTGCTCGGCGGACCCGGCACATGA
PROTEIN sequence
Length: 313
MSSRGDPPLPAVDGVPAARLHLPRGGAWSTVAEFLLDRTRKAPGVQRRIDAGEVLLGDGSVVRPGTPYVPGGWVYLYRDLPDEAPVPGEITVLHADSDIVVVDKPHFLATMPRGRHVVQTVVVRLRRELGLPELAPAHRLDRLTAGVLLLTARREIRGAYQELFARREVAKTYLALASVRADLALPTEVRSRIVKPRGSLQAIEVPGEPNAVTRVELAGAPGVASAANGRGNGAALYRLTPSTGRTHQLRVHLAGLGIPIVNDPLYPVVLDREPGDFTRPLRLLAHRLEFTDPLSGERRSFASRRVLGGPGT*