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scnpilot_solids2_trim150_scaffold_163_curated_6

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: 6601..7746

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma24 factor n=1 Tax=Actinopolymorpha alba RepID=UPI00037CF771 similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 380.0
  • Bit_score: 592
  • Evalue 3.80e-166
RNA polymerase sigma24 factor {ECO:0000313|EMBL:ETK37650.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.3
  • Coverage: 380.0
  • Bit_score: 599
  • Evalue 4.30e-168
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 77.1
  • Coverage: 380.0
  • Bit_score: 566
  • Evalue 9.10e-159

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Taxonomy

Microbispora sp. ATCC PTA-5024 → Microbispora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1146
ATGAACCCGGAGTTGCTGCGCGACCAGGTGCCCGCGGTGATCGGGGCGCTGGTGCGGCGCGGGGCGGACTTCTACTCCGCCGAGGACGCGGTGCAGGACGCGCTGCTGCAGGCCCTCGGTGCGTGGTCGGATGATCCGCCCCGCGATCCGGTGGCGTGGCTGGTGACGGTGGCGTGGCGCAAGTTTCTGGATCGGGGCCGCGCCGACCGGTCCCGCCGGGCGCGGGAGACCGCCGTCGATGTCGAGCCGCTCGCCGGCCCGGTGCCGAGCGCCGACGACACCCTGGCGCTGTACTTCCTGTGCGCGCACCCGTCGCTGCCGTCGGCGTCGGCCACCGCGCTGACCCTGCGCGCCGTCGGGGGCCTGACGACTAGGCAGATCGCTGCGGCCTATCTGGTGCCGGAGGCGACGATGGCGCAGCGCATCAGCAGGGCGAAGCGACGCATCGCGGGACTCCCGCTGGACCGGCCGGGCGACCTCGCGACGGTGCTGCGGGTGCTGTATCTGGTGTTCAACGAGGGATACGGCGGTGACGTCGATCTCGCCGCCGAGGCGATCCGGCTGGGCCGGCAGCTGCACGCTCTCACCGACGAGCCCGAGGTGGCCGGCCTGCTCGCCCTGATGCTGCTGCACCACGCGCGGCGCGCCGCACGCATCGGGCCCGCGGGCCGGCTGGTGCCGCTGGACCGGCAGGACCGAACCCGGTGGGACGAGGCGTCGATCGCCGAGGGGGTGACGATCCTGCAGGCGGCGCTGGCCCGTGATCGGCTGGGTGAGTATCAGGCGCAGGCGGCGATTGCCGCGCTGCACGCCGATGCCCGGACGGCCGACGAGACCGACTGGGTGCAGATCGTCGAGTGGTACGACGAGCTGCTGCGGCTGACCGGCAGCCCGTTGGCGGCGCTCAATCGTGCGGTCGCGGTGGGCGAGGCCGACGGGCCCCAAGCCGGCCTGGCCGCGCTCGCCGAGGTGGACGCCGCGTTGCCGCGCCACACCGCCGCCGCGGCGTACCTACACGAGCGCGCGCGTGACACAGCGCTGGCTGCCGACCTGTACGCGCAGGCCGCGCGGGCGGCGACTAGCGCGGCGGAACGCGACCATCTGACCCGGGAGGCCGCCCGGCTTCGGCAGCAGGCGAGGCGCTGA
PROTEIN sequence
Length: 382
MNPELLRDQVPAVIGALVRRGADFYSAEDAVQDALLQALGAWSDDPPRDPVAWLVTVAWRKFLDRGRADRSRRARETAVDVEPLAGPVPSADDTLALYFLCAHPSLPSASATALTLRAVGGLTTRQIAAAYLVPEATMAQRISRAKRRIAGLPLDRPGDLATVLRVLYLVFNEGYGGDVDLAAEAIRLGRQLHALTDEPEVAGLLALMLLHHARRAARIGPAGRLVPLDRQDRTRWDEASIAEGVTILQAALARDRLGEYQAQAAIAALHADARTADETDWVQIVEWYDELLRLTGSPLAALNRAVAVGEADGPQAGLAALAEVDAALPRHTAAAAYLHERARDTALAADLYAQAARAATSAAERDHLTREAARLRQQARR*