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scnpilot_solids2_trim150_scaffold_3960_curated_7

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: 4455..5054

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WAA6_KINRD similarity UNIREF
DB: UNIREF100
  • Identity: 44.6
  • Coverage: 186.0
  • Bit_score: 138
  • Evalue 7.80e-30
ECF family RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 44.6
  • Coverage: 186.0
  • Bit_score: 138
  • Evalue 2.50e-30
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABS03745.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.6
  • Coverage: 186.0
  • Bit_score: 138
  • Evalue 1.10e-29

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Taxonomy

Kineococcus radiotolerans → Kineococcus → Kineosporiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 600
ATGGACAGCCGCGCGGAGGCGACGAGCGACCCATCGTCGTCGGCGGCGGTGGCGCATACCGATCAGGCCGGGTCGCCCGGCTCGCGGACCTTCCGGCAGCTATTCCACGACGAGTTCGGCGGCATGGTCGCACTGGCCAGGCTCTTGGGCAGCGACGACCCGGAGAACACGGCGCAGGAGGCGTTCGTCCGGCTGCACTCTCGCTGGGACTCCCTGCACGATCCGGCGGCGGCGGTCGGCTACCTGCGCACGTCGGTGGTGCGGCTGAGCCGCAACCGGCTGCGGCACCTGGCGGTGGTACGTCGCCATGCCCGCACCGAGCACCCCGGCGATCACACCCCCGCCGAGTCGGCCGAGGCCGATGCCCTGCAGCGGGCCGACGTCCAGGCGGTGCGGTCGGCGCTGGACCGGCTCCCGGCCGCACGCCGCGCAGCACTCGTGCTGCGCTTCTACGCCGACCTGCCCTACGACGAAATCGCCGAGGCGCTGCGCTGCCCGGCGGCCACCGCCCGCTCGCACGTGCGCCGCGGCCTGGCCGAGCTGGCGCGACTGCTGGGCGAACGGAACGACGACTCTTCGAATCAAGGAGAACGGCGATGA
PROTEIN sequence
Length: 200
MDSRAEATSDPSSSAAVAHTDQAGSPGSRTFRQLFHDEFGGMVALARLLGSDDPENTAQEAFVRLHSRWDSLHDPAAAVGYLRTSVVRLSRNRLRHLAVVRRHARTEHPGDHTPAESAEADALQRADVQAVRSALDRLPAARRAALVLRFYADLPYDEIAEALRCPAATARSHVRRGLAELARLLGERNDDSSNQGERR*