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scnpilot_solids2_trim150_scaffold_16_curated_12

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: comp(14365..15189)

Top 3 Functional Annotations

Value Algorithm Source
Polyamine ABC transporter permease n=15 Tax=Pseudomonas syringae group RepID=F3E128_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 35.4
  • Coverage: 257.0
  • Bit_score: 171
  • Evalue 1.50e-39
Polyamine ABC transporter permease {ECO:0000313|EMBL:BAP41928.1}; TaxID=1028989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. StFLB209.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.2
  • Coverage: 264.0
  • Bit_score: 172
  • Evalue 7.20e-40
polyamine ABC transporter permease; K02053 putative spermidine/putrescine transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 35.4
  • Coverage: 257.0
  • Bit_score: 171
  • Evalue 4.70e-40

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Taxonomy

Pseudomonas sp. StFLB209 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 825
GTGCTAGCCCGCATCAGCAACCGACTGCTACTGGTCTTCCTGGTGGCCTTCCTCGCGGCTCCGACGATCGCCGTCGTCATCGTGTCGTTCGGGAACGCCAGCGTGATCCAACTGCCCCCCAAGGGATTCAGCCTCCAGTGGTATGGCAAGGTGCTGACCGACCCGGCGTGGTTGGCTGCGATCGGTCGCATCCTCATGGTGTCCCTTCTCGCGGTGATCCTGGCCGGTACGGCTGGCACCATGCTGGCGTTCGCGATCGCCCGCGGCGGGCTCAGCGCGACGACCCGCAAGGTGTTCCAGGTGGCGGCGATCTTTCCACTGGCAATTCCTCCGGTGGTAATCGCGCTCGGCGGCTACACCATGTGGTCGCGCCTGGGTATCACGAACTCGATCTGGAGCCTGGTCCCGCTGTACGCGGCGCTCGGCTGCCCGTTCGTCTTTCTGTCTGCGCTGGGAGTCCTCGAGAAGGTCGGCACCGATCTGGACCAGGCATCAGCGTCCCTCGGTGCAACGCGGAGCTACACGCTTCGCCGAGTGACGCTGCCGTTGATCCTTCCGGCCGTTCTTACCGGCTGCGGGTTCGCACTGCTCACCTGCATGGAGGAGATCGTGATCGCGTTGTTCCTGCTGGGCGGCCACAGCGAGACGCTGCCACTGAAGATCTACGCGAGCCTGAATTTCGGTGTGGCACCCGATATCGCTGCCGTGACGACCCTGCAAATCGGGTTGGCGGTCGCGGTCGCGATCGCCGGCGCCGTGTGGTCGTGGCTACGTCAGCGCCGCCGTCAGCTCGTTAGCCATGGGGAGATTGATCACGATGAGTAA
PROTEIN sequence
Length: 275
VLARISNRLLLVFLVAFLAAPTIAVVIVSFGNASVIQLPPKGFSLQWYGKVLTDPAWLAAIGRILMVSLLAVILAGTAGTMLAFAIARGGLSATTRKVFQVAAIFPLAIPPVVIALGGYTMWSRLGITNSIWSLVPLYAALGCPFVFLSALGVLEKVGTDLDQASASLGATRSYTLRRVTLPLILPAVLTGCGFALLTCMEEIVIALFLLGGHSETLPLKIYASLNFGVAPDIAAVTTLQIGLAVAVAIAGAVWSWLRQRRRQLVSHGEIDHDE*