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scnpilot_solids2_trim150_scaffold_16_curated_14

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: comp(16088..17242)

Top 3 Functional Annotations

Value Algorithm Source
Putative ABC transporter binding protein subunit n=1 Tax=Pseudomonas sp. CF161 RepID=S6JDV8_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 34.6
  • Coverage: 298.0
  • Bit_score: 165
  • Evalue 8.80e-38
extracellular solute-binding protein family 1; K02055 putative spermidine/putrescine transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 30.2
  • Coverage: 387.0
  • Bit_score: 165
  • Evalue 4.70e-38
Putative ABC transporter binding protein subunit {ECO:0000313|EMBL:EPL15561.1}; TaxID=911241 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF161.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.6
  • Coverage: 298.0
  • Bit_score: 165
  • Evalue 1.20e-37

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Taxonomy

Pseudomonas sp. CF161 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1155
ATGAAACAGCGCACTGGGCGCGCGGTCGGTATCGGCATCGTCAGCCTCGCCCTGGTCATCACGTCCGCCTGCTCATCGACGGGCGGTGAAGCCGGTGGCACCTCCGGAGCGACCGGCGGCGGGACATCCGGCACGCCCACCTCGTCCGGCGACGGCAGCCAGTCGTTCGCGGGGCGCAGTATCACGGTGCAGTCCTGGGGCGGCGCCGTCACGGACGCCGAGACCGCCGCGTTCTATCGGCCGTTCGAGGCCAAGACCGGCGCCAAGGTCAACGTCGCCGTGTCTACCTCCGAAACCCTTGCACTGCTGAAGAAGCAGGTCGACTCCGGGTCCGCGGGCTGGGACGTCGTCACCGGCATGTCAACCGACCTGTTGGGCACGGCACAGAAGGAGGGGCTGATCGAAAACATCGACTACGCCAAGGTGCCGGGAGCAGACAAGCTCGCCGATGGTGCGAAGTTGCCCGATGGCCTGGGTTACGACGTCGAAGGAATCGTCGCGGCCTATTCCACCAAGGAAGGCGTCAAGCCATTGAAGTCAATGGCGGACTTCTTCGATACCAAGAACTTCCCGGGGCCACGTGGCGCAGCCAACTGGGGCATCGCCACCCTGCAGTGCGAGGTGGCCGATCTCGCTGCCAAGACCCCGGAGAAGGACATGTACCCGATCAACGTCGATTCCTGCCTGCAGCACTGGAAGGCCTTGGACGGCGCGGATATCTCCTGGTACGACTCCGGAAGTCAGATGGCTCAGTCGCTCGTCAGCGACGATGTCGACTACTGCATGTGCTACGACGGGCGAGTGAACCAAGCCGCAGCCATTAACGCCGACTGGAAGTACACCTACGACGGTTCGGTGGGATTCTTTGACTACGCTTCCATCGTCAGTGGCACGAAGAACGCGGACATCGCGCACGCCCTGCTCGAGTTCATGACGACCCCCGAGGCACAGGCCGCCTACTCGTCCGCCATCAAGTACAGCCCCTCCAACCCCGCCGCGCTAGAGTTACTGCCGCAGTCGCTGCAGGGTACGATGGCTACCTCACCGGACAATGACAAGCTGGTCTACCGCCGGCCCGCATCCGCGGTCGAAGTGGTCCAGAAGCAGACTGACGAGGTTCAAAAGGCCTGGGATAACTGGGTTTCGTCCCGATGA
PROTEIN sequence
Length: 385
MKQRTGRAVGIGIVSLALVITSACSSTGGEAGGTSGATGGGTSGTPTSSGDGSQSFAGRSITVQSWGGAVTDAETAAFYRPFEAKTGAKVNVAVSTSETLALLKKQVDSGSAGWDVVTGMSTDLLGTAQKEGLIENIDYAKVPGADKLADGAKLPDGLGYDVEGIVAAYSTKEGVKPLKSMADFFDTKNFPGPRGAANWGIATLQCEVADLAAKTPEKDMYPINVDSCLQHWKALDGADISWYDSGSQMAQSLVSDDVDYCMCYDGRVNQAAAINADWKYTYDGSVGFFDYASIVSGTKNADIAHALLEFMTTPEAQAAYSSAIKYSPSNPAALELLPQSLQGTMATSPDNDKLVYRRPASAVEVVQKQTDEVQKAWDNWVSSR*