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scnpilot_solids2_trim150_scaffold_16_curated_17

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: comp(20869..21636)

Top 3 Functional Annotations

Value Algorithm Source
anti-sigma factor n=1 Tax=Salinispora arenicola RepID=UPI00037912E6 similarity UNIREF
DB: UNIREF100
  • Identity: 33.3
  • Coverage: 252.0
  • Bit_score: 116
  • Evalue 4.10e-23
Uncharacterized protein {ECO:0000313|EMBL:KEP74497.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 31.3
  • Coverage: 252.0
  • Bit_score: 118
  • Evalue 1.10e-23
putative transmembrane anti-sigma factor similarity KEGG
DB: KEGG
  • Identity: 31.9
  • Coverage: 251.0
  • Bit_score: 115
  • Evalue 2.20e-23

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Taxonomy

Microbacterium sp. SUBG005 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 768
ATGACGTGCAGTGACGAGCGCTTCCGGCATGCGGTCGGCCCCTACCTGCTGGGCGCGCTCGACGAGGCGGAGCGGGTGGCATTCGACGCACATCTGGTCGGGTGCACGGACTGTCGGGCGGAGTTGGCGCAGCTGCGACCGGTGGTCCAGGCACTCGGAACGGTGTCCGAAAGCGACGTGTCCGGGCTGGTTCCGGCGGGTGCAGCGCCGCCGGACACCCTGCTGCCCGGCCTGCTGACCCGCGCCGCTCGGCGGGATCGCCGGCGCCGGCTGCTGCTCGCCGTGGCGGGCGGGATCGCCGCGGCGGCCGTGGCGGCACTCGCCGTCGTCCTCGTCACCGACGGATCCGGAGGGTCACCCGGATCTCCGCCGGGCACGTCAGCCGACGGGCAGGTGATGGCGATGAGCCCTCTCGACGGCGGCGCGGTCCGGGCCACTGCGACGGTGACGGGCATGCCGTGGGGCACCAAGATCACGCTGCACTGCCACTACCAGACGGCGCTGACCAGCACCGGCGGGTCTGGTTCTGCGGGGACAGGGGGCCCCGGGGGCGTCGGTGGTTCCGAGTATCCGACACGCCCCGGGGCGTCGGTGTACTCGCTACGGGTGATCGACACCGCAGGCTCGGTGCACGACGTCGGGTCCTGGGCGGTGGCCGGCGGGCAGGACACCGTCTTCACCGGCGGCACCTCGGTGCCGATGGGTCAGATCGGCCGCATCGACGTGGTCGCGGCGGATGGCTCGACGGTGCTCACCGCGGCCGGGTGA
PROTEIN sequence
Length: 256
MTCSDERFRHAVGPYLLGALDEAERVAFDAHLVGCTDCRAELAQLRPVVQALGTVSESDVSGLVPAGAAPPDTLLPGLLTRAARRDRRRRLLLAVAGGIAAAAVAALAVVLVTDGSGGSPGSPPGTSADGQVMAMSPLDGGAVRATATVTGMPWGTKITLHCHYQTALTSTGGSGSAGTGGPGGVGGSEYPTRPGASVYSLRVIDTAGSVHDVGSWAVAGGQDTVFTGGTSVPMGQIGRIDVVAADGSTVLTAAG*