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scnpilot_solids2_trim150_scaffold_292_curated_1

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: 1..2562

Top 3 Functional Annotations

Value Algorithm Source
Putative LysM domain peptidoglycan-binding protein n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RP67_BLASD similarity UNIREF
DB: UNIREF100
  • Identity: 47.4
  • Coverage: 889.0
  • Bit_score: 708
  • Evalue 8.10e-201
putative LysM domain peptidoglycan-binding protein similarity KEGG
DB: KEGG
  • Identity: 47.4
  • Coverage: 889.0
  • Bit_score: 708
  • Evalue 2.50e-201
Putative LysM domain peptidoglycan-binding protein {ECO:0000313|EMBL:CCG02728.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.4
  • Coverage: 889.0
  • Bit_score: 708
  • Evalue 1.10e-200

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Taxonomy

Blastococcus saxobsidens → Blastococcus → Geodermatophilales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2562
CAGGAAACGCTGACCGACCCGGACCACATCGAGCCGGGCTGGACCATCACCATCCCGTCTGCACACCATCAGCCGCCCGCGGGCGTGGACACCGTCCCGGCTGGCGGCCGCCACCACGCCGCGGGGCCGACCGCCGACCAGCCCGATTCCGCAGCACCCGCAGAACCGTCCGCGCCGCCATCACCGCCGACAACCTCCAGGCCGCCCGCGACATCCACATCGCCGCAACCCGCCCGGGGCGCACCGGAATCCGCCGCACTGTCGCCGGCACAGACGACACCGCCGGCGCCGAGCGGAACGGCGGGTTTGCATCTGGGCGATGCCACCGCGCCGCCAGCCCACCGTCCCGGCTCGGTGACCACGGCTGTGCCAACGCCTGCCGCATCGGCGGCCCGGCAAGCCAGCATCGACGGCGAGGCCGAGTTCGAGCCGATCGGCTGGCCGATGCTGGCAATCGTCGGTGGTGGCATCCCGCTGCTGGCCGGGGTGAGCTTCCTGACGCTACGTCGATATCGCCGCCGACAGGACAGGTTCCGCCGGCCCGGGAGGGCGATCGCCGGCGCGCCCGCCCGGTTGCGCCGGATGGAGCAGGCGTTGCTCACCGCCGGGCCTGGCGCAACCGGCACGGTCAATCGGCTCGATCACGCCTTGCGCGGCCTGGCGGCCGCGGTGCGCGACGGGACCCTGCGTGCCCTGCCCGCCGCCGTGGCCGTCCGGATAGGCCCGGACGGGATCGAACTGCTGCTGGCCCGCGCCGATGTCAGCGCGCCGGAGCCGTGGCGCGCCGACGCCGACGGGCTGCACTGGCTGCTGCCCGCCGAGGCCCTCCTGATCTACGACGACGCCACCGAACGGGAGCACACCCTGGCCCCCTATCCGGCGCTGGTGTCCGTGGGCCACACCAGCAGCGGCGAGCAGTGGCTGCTGGATGTGGAGCAGATCGGGGCGCTGCGCCTGACCGGCCCCGCAGCGCGGTGCGCGGATCTGCTGCGATTCATGGCCGCGGAGCTGGCGCACAACACCTGGTCGGAGATGCTGACCGTCACCGCGGCCGGCCTGGGCAGCGAGCTGGCGCCACTGAACCCGGACCGGCTGACCATCACCGACGATCCCGCCGCTGCCACCGCGCAGCTGCGGCGACACGTCGCAGATGTCCGCACTGACCGGGACGCCGGGGTGTCCGTGTTGGACGGGCGGGCCCTGGGCGGCGATCGGGAAGTGTGGCCGCCTCAGGTGCTGCTACTGGCCGACGGCGGCGACACCGCGGACCTGTCGGAGGTGATCGACCAGGTGCAGGCGGACCCTGCGCGGCTCGCCGCCGCGGTGGTCTTGACCGGGCGGGCAGACGTGCAGGTCGGCTGGCAGGCACGACTGGACGAGGATGGCCTGCTGCACATCCCGGACCTGGGCATCCATGTCATCGCCGAACGGCTGCCGGCGCAGGAGGCGGGGCAGCTGGCCGAGCTGCTGGCCGGGGCCGGCGACGTGCAGGACGTGCCGACGCCGCCGTCGACGGGAGACCGGCCCTGGAATGATTTCGCCGATGCCGCCGGCGCGCCGGTCCCGGACGCGGCGGCCACCGGGCGGCCGCCGCTGCATGTGGCGGGCCAGCTGGCCACCTCCACGCCGCGGCTGTTGCCCTTGTCAATCGACGCCTACACCGCCCGGGCGGCTGCCACCGCCGAGGATGTGCAGGCGCTGGCCCCATCGGTGGGTGACGGGCGCCGCGGCGACGTGGAGACCTCGCTGTCGGGACTGGACGCCGATCTGGCCGACTGGCGGGAGCCGGACTGCCCGCGACCGAAGATCACGCTGCTCGGCCCGGTACAGGTGCACGCCGGCGGCCAGCTACCCACCGACAAGCCGCGCGTGGCGTGGAACACCGAGGTGATGGCCTTCCTGGCCTGCCGGCCCCAGGGCGCCACCGCCGAGCAGTACGGCACCGCGCTGTGGCCGGACGACCCGGATATCGTCGGAAAATCCAAGGTTCGCCAATCGGTGCACATCGTGCGCCGTTGGCTGGGAGCAAACCCGCGCACCGGCAGGGACTACCTGCCGACGAACCCGGGCGTGTCGGGCATCGTGTATCGCATCGAGGACGCGCTGGTGGACGCCGACCTGTTCCGGCAGCTGCGATTGCGCGGCACGGCCCGCGGAGCGGACGGCATCGCCGACCTGCAGACGGCGTTGACGCTGGTGCGCGGACTGCCGTTCGACCGGCGCCGACCCGCCGGCTACGGATGGCTCGCCGCGGATGCACTGGACCACCAGTACACGGCGATGATCGTCGATGTGGCGCACACCGTGGCCACCCATCACCTTGCAGCCGGCGACCCGACGGCCGCCGCCGCAGCAGCCGAGGTGGCCTTGTTGGCCGGCAGTTTCGAAGACACCCCACTGCTTGATCTAGCCGCCGCGTGCGAGGCACGCGGCATGGACGCGGAAGTCGAGGCCTATGTGCGGCGGATCATGGCTAACCACGACGTCGACGAGGAGGTCGATCTGCCGCCACGAACGTTCGAGATCCTGCACCGCCGCGGCTGGCTCCGCGAGGCCAGCTGA
PROTEIN sequence
Length: 854
QETLTDPDHIEPGWTITIPSAHHQPPAGVDTVPAGGRHHAAGPTADQPDSAAPAEPSAPPSPPTTSRPPATSTSPQPARGAPESAALSPAQTTPPAPSGTAGLHLGDATAPPAHRPGSVTTAVPTPAASAARQASIDGEAEFEPIGWPMLAIVGGGIPLLAGVSFLTLRRYRRRQDRFRRPGRAIAGAPARLRRMEQALLTAGPGATGTVNRLDHALRGLAAAVRDGTLRALPAAVAVRIGPDGIELLLARADVSAPEPWRADADGLHWLLPAEALLIYDDATEREHTLAPYPALVSVGHTSSGEQWLLDVEQIGALRLTGPAARCADLLRFMAAELAHNTWSEMLTVTAAGLGSELAPLNPDRLTITDDPAAATAQLRRHVADVRTDRDAGVSVLDGRALGGDREVWPPQVLLLADGGDTADLSEVIDQVQADPARLAAAVVLTGRADVQVGWQARLDEDGLLHIPDLGIHVIAERLPAQEAGQLAELLAGAGDVQDVPTPPSTGDRPWNDFADAAGAPVPDAAATGRPPLHVAGQLATSTPRLLPLSIDAYTARAAATAEDVQALAPSVGDGRRGDVETSLSGLDADLADWREPDCPRPKITLLGPVQVHAGGQLPTDKPRVAWNTEVMAFLACRPQGATAEQYGTALWPDDPDIVGKSKVRQSVHIVRRWLGANPRTGRDYLPTNPGVSGIVYRIEDALVDADLFRQLRLRGTARGADGIADLQTALTLVRGLPFDRRRPAGYGWLAADALDHQYTAMIVDVAHTVATHHLAAGDPTAAAAAAEVALLAGSFEDTPLLDLAAACEARGMDAEVEAYVRRIMANHDVDEEVDLPPRTFEILHRRGWLREAS*