ggKbase home page

scnpilot_solids2_trim150_scaffold_508_curated_15

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: 16320..18263

Top 3 Functional Annotations

Value Algorithm Source
Extracellular solute-binding protein family 5 n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WKW8_ACTMD similarity UNIREF
DB: UNIREF100
  • Identity: 33.5
  • Coverage: 568.0
  • Bit_score: 301
  • Evalue 2.30e-78
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 33.5
  • Coverage: 568.0
  • Bit_score: 301
  • Evalue 7.10e-79
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ACU34723.1}; Flags: Precursor;; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.5
  • Coverage: 568.0
  • Bit_score: 301
  • Evalue 3.20e-78

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Actinosynnema mirum → Actinosynnema → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1944
ATGTCGGGGAGACGCACAAGCCGCACGATCGCCGCCGGACTGCTGGCGGCAGCGATGACGCTGGCGGCCTGCAGCACCGCCATCGTCGGCACCCCCCGGGCCGGCGAAACACCCCCGCCGACCCCACCCAGCACAACCAGGACGCCGCCCGAGACGTCGACGACGACCTCCTCACCGATACGCCCCACGCCAGCGAGCGACACGTCGCCCTCCCCGTCGGGTACCACCTCGCAGCCGCCGGCCAGCACCACGAGTTCGTCACCGACCATGCCGCCGGCCGGCTCGACCAGCCCGATGCTCGGGCACCACGACACGGTGTCCCGGCCCGAGGTGACCGCCGGCGGCGCGGTCACCGTCGAAGTGCCCACCCTGCCGACCAGTTACGACGTCAACAGCTACACGTCGACCGGCTACATCACCGAGGTGGCGGCGCTGACCCAGCCGTCGCCCTACCTGGTGGACCCGTATGGGGCGGTCGCGCTGGACACCGACGTGATGCACGGCACCGCCCTCTACACCGATCCGCAGAAGGTGGTGTACGAGATCAATCCGAAGGCCGTCTGGTCCGATGGCGTCGCGGTCAGCTGCCGGGACTTCTACCTGGAATGGCTGGTCAACACCTCCCAGGCGACCGACCCGAAGGACGACGGCAGTCTGGCCTTCGCGGTGTACCCCAACACGCTGTACCACCAGGTCAACCGGCCGCGGTGCTCGAACGGCGGGCGCACCGTCACGGTCACCTTCTCCACTCCCACCGCCAGCTGGCAGAACCTGTTCACCGGGCTGTTGCCCTCACATATTGCGGCCAAGGACGCCGGGATCGCCAACATCACCACGATCGGCAAGAACGCCACGAAGGGTCGGGTGCTCAAGCTGGCGGCGGCGTACAGGAAGGACTTCGGCACGCTCACGCCGGACAAGGCCGTCTCCGCCGGGCCTTACGTCGTGGCCTCCGTCGCCGACACCGAGATCGTGCTGAAGCGAAACCCGAAGTGGTGGGGCAATCCCGCGGGTCCGGAGTCCATCCGGCTGGTCGCGACGGCGGATCCGGCGGCGGCCGTGCAGAGCCTGCGGAACGGCGAGGGTGACGTGGCCAGCGTGACGGACCAGGACCCGTCGCAGGCCGATCGGCTGCAGCCTGCGGACGGCATCACCCGGACGGACCAGATCTGGCCGGTCAGCGAGCACATCGAGTTCAACATGCGCCGACCACTGTTCACCGGCAAGGCCGGAAAGGCGCTGCGGCAGGCCATGTTCCAGTGCGTCGACCGGACGGCGATCCTGGACAAGGTGGCGCGCCCGGTGAATCCTGAGGCGGCTCTGCTGGGCAATGTGATGGTGGCGCCGTGGGATCCGGCCTACACCGATCACTACCGTCAATACCGCAGCGCGAACGCGGCCAAGGCCAAGAGTCTGCTGCAGCAGGCGGGCTGGACGTTGGGGAAGGATGGCGTGTTCGAGCACGGCTCGACCAAGGCACACTTCACCCTTGGCGTGCTGCCGAAGGCCAGCCGTACCGCGATCGGCGCGATGATCACACAGGAGTGCGCGAAGGCCGGTATCGACATCACCGTCGCCGATCTCGACGCGAGCAGGCTGTTTTCCGGGAAGTTCCAGGCGGCGCTGTTTGCCTGGTCGGCGCCGATCAGTCCAGCGGACTACGCCTACACCTACGTCGGCAAGTCCGGTGGAAATACCAGCGGCTACAGCAACCCGAAGGTGGATGCGCTGTTCGCCGACATCGCCTCCGACGTGAAGCCGCGGGACGAGACGGGGCGACTCAACGAGATCGACGAGATTCTCGCCGGCGATCAGGTGGTGCTGCCGCTGTACGACTGGTCGGCGGTGAACCTGCAGAGCGAGCGGGTCCACACCACCGTGACGAACAACTACTTCTGGGGTGGGCTGGTGTGGGACGCGTACGCCTGGGCGGTGGGCAGCTGA
PROTEIN sequence
Length: 648
MSGRRTSRTIAAGLLAAAMTLAACSTAIVGTPRAGETPPPTPPSTTRTPPETSTTTSSPIRPTPASDTSPSPSGTTSQPPASTTSSSPTMPPAGSTSPMLGHHDTVSRPEVTAGGAVTVEVPTLPTSYDVNSYTSTGYITEVAALTQPSPYLVDPYGAVALDTDVMHGTALYTDPQKVVYEINPKAVWSDGVAVSCRDFYLEWLVNTSQATDPKDDGSLAFAVYPNTLYHQVNRPRCSNGGRTVTVTFSTPTASWQNLFTGLLPSHIAAKDAGIANITTIGKNATKGRVLKLAAAYRKDFGTLTPDKAVSAGPYVVASVADTEIVLKRNPKWWGNPAGPESIRLVATADPAAAVQSLRNGEGDVASVTDQDPSQADRLQPADGITRTDQIWPVSEHIEFNMRRPLFTGKAGKALRQAMFQCVDRTAILDKVARPVNPEAALLGNVMVAPWDPAYTDHYRQYRSANAAKAKSLLQQAGWTLGKDGVFEHGSTKAHFTLGVLPKASRTAIGAMITQECAKAGIDITVADLDASRLFSGKFQAALFAWSAPISPADYAYTYVGKSGGNTSGYSNPKVDALFADIASDVKPRDETGRLNEIDEILAGDQVVLPLYDWSAVNLQSERVHTTVTNNYFWGGLVWDAYAWAVGS*