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scnpilot_solids2_trim150_scaffold_230_curated_35

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: 35318..36670

Top 3 Functional Annotations

Value Algorithm Source
Extracellular solute-binding protein family 1 n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SEX3_INTC7 similarity UNIREF
DB: UNIREF100
  • Identity: 55.8
  • Coverage: 394.0
  • Bit_score: 437
  • Evalue 1.80e-119
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EWT01474.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.7
  • Coverage: 387.0
  • Bit_score: 464
  • Evalue 2.00e-127
extracellular solute-binding protein; K11069 spermidine/putrescine transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 55.8
  • Coverage: 394.0
  • Bit_score: 437
  • Evalue 5.80e-120

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Taxonomy

Intrasporangium oryzae → Intrasporangium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1353
GTGAGCGAACGCGAACCCATCATCCCCCCCGCCCTGCTCGGGTCGGCCGGCCTGTCTCGGCGCAGGGTGTTGCGCGGAGCCGGCCTGGCCGGCGCCGCGGCCTTCCTGGCCGCCTGCGGCGTGAAGGGCACCGGTGGCGGCACAGGATCCGGATCGGGCCCCTCCGGCGGCGGGTCGTCCCCGTCGACGTCCGCGGGGGGCGGCGGGTCGGCCACCGGCGGCGGCAGCGGCTCGACGGGCGGCGGGTCGACGTCCGGCGGCACCGCCGCGGCGAGCGGCACGGGCGGTTCCGGCGGCGGCGACACCGTGGTGGACCGCTCCGACACCGACAAGGTCGTCAACTGGTCCAGTTGGCCCGAGTATCTCGACGTCGACGACAAGGACCCGAACAAGCACCCGTCCATCGACCAGTTCACCGCGAAGACCGGGATCAAGGTCAATTACACCGAGGACGTCAACGATAACGACCAGTACTTCGCGAAGATCCAGCCGCTGCTGGCGGCCGGCCGGCCGATCACCGCGGACGTCTTCGTCGTCACCGACTGGATGGTCGGCAAGCTGATGCGCCTGGGGTACCTGCAGGACATCGACCACTCGCTGATCCCGAATCTGAAGAACCTCAACCCGGAACTCAAGAACGTCACCTTCGACCCCGGCCGGAAGCAGTCCATCACCTGGCAGTCCGGGTTCGCCGGCATCGCCTACAACCCCGACGTCACCGGCAAGCCCATCGAGACCATGGACCAGATGCTCACCGACCCCTCCCTCAAGGGCAAGGTCACCCTGCTCACCGAGATGCGCGACACCGTTGGCCTCACCCTGCTGGACATGGGCGTGGACTGCAGCAAGTTCACCGACGCCGAGTTCGATGCCGCGATCGCCAAGCTGCAGAAGGCCGTGGACGCCGGCCAGATCCGGCAGTTCACCGGCAATGATTACGCGCAGGGGCTGGTGTCCGGCGACATCGCCGCCTGCGCCGCCTGGACCGGCGACGTGGTGCAGCTGCAGGCCGACAACCCGAACCTGAAGTACGTGCTGCCCAAGGCGGGCTGCACGCTGTGGAGCGACAACTTCGTCATCCCCAAGGGCACCCCGCACAAGAAGAACGCCGAGCTGCTGATCAACTTCTACTACGACCCGAAGATCGCCGCCGAGGTCGCTGACTATGTCAACTACATCTCGCCGGTGGTGGGCGCCAAGGAGCAACTGGTCAAGACCGACCCGGACGTGGCCAACAACCCGCTGATCTTCCCCTCCGACGAGGTGATGAAGCGCGCCAAGGTGTTCATGGCGCTGGACGAGGATCAGGAGAAGCGCTACTCCGCGGCCTTCGCCAAGCTGATGGGCTCATGA
PROTEIN sequence
Length: 451
VSEREPIIPPALLGSAGLSRRRVLRGAGLAGAAAFLAACGVKGTGGGTGSGSGPSGGGSSPSTSAGGGGSATGGGSGSTGGGSTSGGTAAASGTGGSGGGDTVVDRSDTDKVVNWSSWPEYLDVDDKDPNKHPSIDQFTAKTGIKVNYTEDVNDNDQYFAKIQPLLAAGRPITADVFVVTDWMVGKLMRLGYLQDIDHSLIPNLKNLNPELKNVTFDPGRKQSITWQSGFAGIAYNPDVTGKPIETMDQMLTDPSLKGKVTLLTEMRDTVGLTLLDMGVDCSKFTDAEFDAAIAKLQKAVDAGQIRQFTGNDYAQGLVSGDIAACAAWTGDVVQLQADNPNLKYVLPKAGCTLWSDNFVIPKGTPHKKNAELLINFYYDPKIAAEVADYVNYISPVVGAKEQLVKTDPDVANNPLIFPSDEVMKRAKVFMALDEDQEKRYSAAFAKLMGS*