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scnpilot_solids2_trim150_scaffold_720_curated_14

Organism: solids_Actinobacteria_3

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 ASCG 9 / 38
Location: comp(14064..15308)

Top 3 Functional Annotations

Value Algorithm Source
Type IV fimbrial assembly protein PilC n=1 Tax=Patulibacter medicamentivorans RepID=H0E2Z0_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 52.0
  • Coverage: 410.0
  • Bit_score: 419
  • Evalue 4.70e-114
Type IV fimbrial assembly protein PilC {ECO:0000313|EMBL:EHN11959.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.0
  • Coverage: 410.0
  • Bit_score: 419
  • Evalue 6.70e-114
type II secretion system protein; K02653 type IV pilus assembly protein PilC similarity KEGG
DB: KEGG
  • Identity: 45.0
  • Coverage: 411.0
  • Bit_score: 365
  • Evalue 2.00e-98

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Taxonomy

Patulibacter medicamentivorans → Patulibacter → Solirubrobacterales → Thermoleophilia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1245
ATGGCGAGCGCCAGCACCTTCGCCTTCCGGGCGATGGACGTCGCCGGGGTCGCCTCGGCGGGCGAGGTGGAGGCCGAGTCGAAGGCTCAGGTCACCGAGCAGCTGCGGCAGCGCGGGCTGATCGTCCTCGACGTCAGCGAGAAGACGAACCCGGTCAACATCGAGGACTTCTTCAAGCGCTGGAAAAAAGTGGACATGCGGGAGCTGGCGGTGTTCTCGCGCCAGTTTGCCACCCTCGTCGCCTCCGGCATGCCGATGCTCCGCACGCTGCACACGCTCGAAGAGCAGACGCAGGACGAGATGATCAAGGAGGCGTGCGCCGGCCTCCGCGCCGACGTGGAGGCCGGCAGCACGCTCGAGCAGGCGATGGCGCGCCACCCCCAGGTCTTCGACCGTCTCTACCGGGCCATGATCCGCTCGGGCGAGCAGTCGGGGCGGCTCGAGAGCGCGCTCGACCAGATCGCCTTCCAGGTCGAGAAAAACGACTCGCTGCGGCGCCAGGTCAAATCGGCGCTGATGTACCCGGCGCTGGTCTTCAGCTTCGCCGCCGTGGTGCTGATCGCGATCGTCGCCTTCGTGATCCCGGTCTTCGCCAACATCTTCAAAGAACTCGCCGAAGAACATCCGGAAGAAAGTGCCGCGCTGCCGATCCCGACGCAGATCTGCGTGACGGCCTCGGAAGCGATCACGGGCTACTGGTTCATCATCATCCCGGTACTCGTCATCGCCGTGATCGCGTTCATCCAGTGGAAGCGGACCGAACGGGGGCGCGAGCTGTGGACGCGCTTCACCCTCCGGCTCCCGGCCAAGATCGGGGATGTGATTCAGAAGGTCGCGCTGGCGCGCTGGTCGCGCACGTTCTCCGGCGCCGTCTCGGCCGGTGTGCCGATGCTCCAGGCGATCAAACTGACGGGGGAGACGGCAGGCAACGTCGTGATCGAACAGGCCATGGACGACGTCTACGCCTCGGTGAAGAAGGGCGGCTCACTCGCCGCCCCGATCGAAGGCAACTCGATCTTCCCCCCGATGATCGGCCACATGGTCGCCGTCGGCGAGGAGACCGGCCAGCTCGAGACGATGATGGACAAGATCGCCGACTTCTACGAGGCCGAGGTCGACGCCAAGGTGAAAGCCCTGACCAGCCTCCTCGAGCCCGTCATGATCGTCTTCGTCGGCGGCATCGTCGGCTTCATCGTCATCTCGATGTACCTGCCGATGTTCAGCATCTACGAAAAGATCCGCTGA
PROTEIN sequence
Length: 415
MASASTFAFRAMDVAGVASAGEVEAESKAQVTEQLRQRGLIVLDVSEKTNPVNIEDFFKRWKKVDMRELAVFSRQFATLVASGMPMLRTLHTLEEQTQDEMIKEACAGLRADVEAGSTLEQAMARHPQVFDRLYRAMIRSGEQSGRLESALDQIAFQVEKNDSLRRQVKSALMYPALVFSFAAVVLIAIVAFVIPVFANIFKELAEEHPEESAALPIPTQICVTASEAITGYWFIIIPVLVIAVIAFIQWKRTERGRELWTRFTLRLPAKIGDVIQKVALARWSRTFSGAVSAGVPMLQAIKLTGETAGNVVIEQAMDDVYASVKKGGSLAAPIEGNSIFPPMIGHMVAVGEETGQLETMMDKIADFYEAEVDAKVKALTSLLEPVMIVFVGGIVGFIVISMYLPMFSIYEKIR*