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scnpilot_solids2_trim150_scaffold_720_curated_16

Organism: solids_Actinobacteria_3

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 ASCG 9 / 38
Location: comp(16461..18248)

Top 3 Functional Annotations

Value Algorithm Source
Type IV fimbrial assembly ATPase PilB n=1 Tax=Patulibacter medicamentivorans RepID=H0E2Y8_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 51.4
  • Coverage: 590.0
  • Bit_score: 551
  • Evalue 8.80e-154
Type IV fimbrial assembly ATPase PilB {ECO:0000313|EMBL:EHN11957.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.4
  • Coverage: 590.0
  • Bit_score: 551
  • Evalue 1.20e-153
type II secretion system protein E; K02652 type IV pilus assembly protein PilB similarity KEGG
DB: KEGG
  • Identity: 50.2
  • Coverage: 552.0
  • Bit_score: 524
  • Evalue 4.70e-146

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Taxonomy

Patulibacter medicamentivorans → Patulibacter → Solirubrobacterales → Thermoleophilia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1788
ATGGACCCGCGGGACTATCCGAGCCACCTGCGGCCGGTCCCCGACTCCGGTGACTCGACCGCCCCCGCGCTGGAGCCGGAGGTCGGCGGCGTCCCCGGCCTGACGCCGCCGCTCGCTCGAGGCCGTTCCAGCGAATTCGTCACCGACGTGCTCGTCGACCTCGGATTCGTCGGCGACGACCGGGCGCGCCAGGCGATCGAAGAAGCCCGGACGGTGGGTCGCCCGCCCGAGCAGCTGCTCTTCGAACAGCGCGCCGTCGACGCGGACCAGCTCTCGCGCGCCGTCGCCGAGCGCTACGGGGTCGACCACGTCGACCTCTCCGCCTACCAGGTCGACATGGCGGCGGCGAACCTGATCCCGGTCGGTACCGCCCGTCGCTACCAGGCGCTCCCGGTCGGCTACGTCGACAAGCGAACCCTGCTGGTGGCGATGGCTGACCCGACGAACGTCCTGGCGGTCGACGACATCCGCATCGCGACCGGTCTCGACTGCCGGATCGGGGTCGCCGCCCTGGAGGACATCGAGGCCCTCATCGGACGCCTCAACACGCTGCAGAGCGCGGTGACCGAGGCGGTCACCCAGGGGGAGGAAGACGAGGAGCTGGCCGAGGTCAGCGAGTTCGAGGTCACGGCCGAAGACGCCCCGGTGATCAAACTCGTCTACAGCATCCTCGGCCAGGCGGTAGGCGAGGGCGCCTCCGACGTGCACTTCGAGGCCGGCGAAGACCAGATGCGGGTCCGCTTCCGCGTCGACGGCGTCCTCCGCGAGGCCGCGCACGTGCCGAAGCGGATGATCAACGCGGTCGTCTCCCGGGTGAAGATCATGAGCGACCTCAACATCGCCGAGAAGCGGGTGCCGCAGGACGGTCGCGTCAGCGTCTCGGTGGCCGAGCGGCGGGTCGATCTGCGCATCACGACCCTGCCGACCCAGCTCGGCGAGGGGGTGACGATCCGCATCCTCGACAAAGAGACGGCGCAGCGCTCCCTTGACGACCTCGGCATGGACGGCACGGCCCGGGAGCGGTTCGTGGGGGCATTCCGGCAGGCGTACGGCGCGGTGCTGGTCACCGGGCCCACCGGCTCGGGCAAGTCGACCACGCTCTACGCGGCGCTACAGGAGCTGAACGCGGTCGAGCGGAACATCCTGACCATCGAGGACCCGGTCGAGTACCAGCTGGCGGGGGTCAACCAGATCAACGTCAACCGCAAGGCCGGCCTGGACTTCGCGACCGGCCTGCGCTCGATGCTGCGCGCCGACCCCGACGTGGTGATGGTCGGCGAGATCCGCGACAGTGAGACGGCCCGGATCGCCGTCGAGGCGGCGCTGACCGGCCACATGATGCTGTCGACCCTTCACACCAACGATGCTCCAGGTGCCATCACGCGGCTGACCGAGATGGGGATCGAGGTCTTCCTGATCGCCTCGGCGCTCGATTGCGTCGTCGCCCAGCGGCTCGCCCGCCGACTCTGCAGCCACTGCAAGCGCCGCATCGCGTTGCCGCCGGAGGCGCTCGCCGAGGTCGACGTCAGGGTGGGCGGCCCGATCGAGGTCTACGAGCCGGTCGGCTGTCCGCGCTGCAACCAGAGCGGCTACCGCGGACGCGTCGGCCTCTTCTCGGTGATGACGATGAGCGAGTCGATCAAACAGATGGCGGTCGCGGGCGCACCCGAGGCGCAGATCGCGGCCACCGCCCGGGAGGAAGGGATGTTCACGCTGCGCGAGGACGGGATCGCCAAGGTGCGGGGCGGGATGACCAGCCTCGAGGAGGTGATACGTGTCACCGCATAG
PROTEIN sequence
Length: 596
MDPRDYPSHLRPVPDSGDSTAPALEPEVGGVPGLTPPLARGRSSEFVTDVLVDLGFVGDDRARQAIEEARTVGRPPEQLLFEQRAVDADQLSRAVAERYGVDHVDLSAYQVDMAAANLIPVGTARRYQALPVGYVDKRTLLVAMADPTNVLAVDDIRIATGLDCRIGVAALEDIEALIGRLNTLQSAVTEAVTQGEEDEELAEVSEFEVTAEDAPVIKLVYSILGQAVGEGASDVHFEAGEDQMRVRFRVDGVLREAAHVPKRMINAVVSRVKIMSDLNIAEKRVPQDGRVSVSVAERRVDLRITTLPTQLGEGVTIRILDKETAQRSLDDLGMDGTARERFVGAFRQAYGAVLVTGPTGSGKSTTLYAALQELNAVERNILTIEDPVEYQLAGVNQINVNRKAGLDFATGLRSMLRADPDVVMVGEIRDSETARIAVEAALTGHMMLSTLHTNDAPGAITRLTEMGIEVFLIASALDCVVAQRLARRLCSHCKRRIALPPEALAEVDVRVGGPIEVYEPVGCPRCNQSGYRGRVGLFSVMTMSESIKQMAVAGAPEAQIAATAREEGMFTLREDGIAKVRGGMTSLEEVIRVTA*