ggKbase home page

scnpilot_solids2_trim150_scaffold_1224_curated_25

Organism: solids_Actinobacteria_3

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 ASCG 9 / 38
Location: comp(26539..27213)

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] similarity KEGG
DB: KEGG
  • Identity: 54.4
  • Coverage: 215.0
  • Bit_score: 222
  • Evalue 1.10e-55
pseudouridine synthase n=1 Tax=Patulibacter americanus RepID=UPI0003B6EE4D similarity UNIREF
DB: UNIREF100
  • Identity: 56.5
  • Coverage: 232.0
  • Bit_score: 237
  • Evalue 1.10e-59
Tax=RBG_13_Actinobacteria_63_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 56.4
  • Coverage: 220.0
  • Bit_score: 243
  • Evalue 2.10e-61

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_13_Actinobacteria_63_9_curated → Rubrobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 675
GTGACTCCTGAGCTCCGCATCGTCCACCTAGATGACGACCTCGCGGTGGTCGACAAGCCGGCCGGGCTCGTCGTCCACCCGGCGCCCTCGCACTCCGGCCCCACCCTGGTGTCGGAGCTGGGGGATCTGCTCGGCGGGGGCGACCCGGAGCGACCGGGGATCGTCCACCGGCTCGACAAGGACACCAGCGGCCTGATGGTGGTCGCGCGCGGGCCCGAGGCCCTGGCGGCGCTCCAGGGGGCGGTCCGCGCGCGGGAGGTCGAGCGGCATTACCTGGCGCTTGCCGGCGGGCGCCTGGCGTCCCGGACCGGGACGATCGACGCGCCGATCGGCCGCGCGACCCGCCGCCGCACCCGGATGGCGGTCGCCGGCGCCGCCTCGCGCGAGGCCCGCACCCATTTCGAGGTCCTGGAGCTGCTGCCGCGCGAGAGCTACGTCGAGGCCCGCCTCGAGACCGGCCGCACCCACCAGATCCGCGCCCACTTCGCCGCGATCGGCCACCCCCTGGTCGGCGACTCCACCTATGGCGGCAAGGACCGCTACGGCCTGGGACGCCAGTTCCTCCATGCCCACCGCCTGGCCTTCCGCCACCCACGTACCGGCGCACCGCTCGACTTCAAATCCCCGCTCCCGGCTGATCTGGCTGCGGCGCTGGAGGCGGCGCGCGGCGAGTAG
PROTEIN sequence
Length: 225
VTPELRIVHLDDDLAVVDKPAGLVVHPAPSHSGPTLVSELGDLLGGGDPERPGIVHRLDKDTSGLMVVARGPEALAALQGAVRAREVERHYLALAGGRLASRTGTIDAPIGRATRRRTRMAVAGAASREARTHFEVLELLPRESYVEARLETGRTHQIRAHFAAIGHPLVGDSTYGGKDRYGLGRQFLHAHRLAFRHPRTGAPLDFKSPLPADLAAALEAARGE*