ggKbase home page

scnpilot_solids2_trim150_scaffold_6598_curated_1

Organism: solids_Actinobacteria_3

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 ASCG 9 / 38
Location: comp(375..2873)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type transport system, involved in lipoprotein release, permease component n=1 Tax=Frankia sp. QA3 RepID=I9KBL9_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 32.7
  • Coverage: 857.0
  • Bit_score: 376
  • Evalue 9.30e-101
ABC-type transport system, involved in lipoprotein release, permease component {ECO:0000313|EMBL:KJE23141.1}; Flags: Precursor;; TaxID=1502723 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.5
  • Coverage: 858.0
  • Bit_score: 379
  • Evalue 1.20e-101
ABC transport system integral membrane protein; K02004 putative ABC transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 32.2
  • Coverage: 860.0
  • Bit_score: 372
  • Evalue 3.20e-100

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Frankia sp. CpI1-S → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2499
ATGGCGGGGATCGTCCTCGGCGTCGGCATGGCGTTCGGCGTCCTCGTCCTGGTGGCGACGATCCACTCCAGCTTCGACCGCCTCTTCGACGCGATCTACGGCAACACCAGCGTCGTCGTCACCGGCCGCTCCGCGGTCGGCCAGGTGCCGCAGCGGACGCTCACCGAGGTGCGGGAAGTCGACGGGGTCGACGCCGCGGTCGGCCGCGTGATGGGGATCTTCCGCGTGATCGGCGACGAAGGCAAGGCACAGAGCGGCTCCTCCTCCACCCTCTTCGTCGCCGGGCAGAACCTGCGCGGACCGGACCCGAGCGGCAGCGAGATCGTCGCCGGCCGCAAGGCGCGCGGCCCCGGCCAGATCCAGCTCGAGCAGTCCTGGGCGAACGCCCACGGCCTCGCGCCGGGCGACCGCATCCGCCTCGCCACCCCGTCGGGACGGGCGAGCCTCCTCGTCGCCGGCGTCTTCCGCTTCAACTCCTCACTCGACCTCGGCGGCTACGGGATGGCGGCGGCGCCACTCGGCTCGGTCCGCCGGATGACCGGCAAACCGACCGGCTGGGACGAAGTCAGCGTGATCGCCGCGGGCGGCGTCGCCGACGAAGCGCTGGCGCGGCGCATCCGCGCCGCCGTCGGCCCGGGGGTCGAAGTCGACACGCTGGCGGCGAAGGGCGAAGAAGTCAACGAAGCGATGGCGAGCCTCGACATCGTCCTCTACTTCTTCTCCGGCATGGCGATCTTCGTCAGCGCCTTCCTGATCCTCAACTCCTTCAACATGACGGTGCTGCAGCGGATCCGCGAGCTCGGCACGCTGCGCGCGCTCGGCGGCTCGCGGCGCCGGATCGCGGGCTCGGTGCTGGGCGAAGCGCTGGCGCTGGCGATCCCCGGCTGCGCCCTCGGCCTGCTGCTCGGGCTCGGCCTCGCCGAACTGCTGGCGGCGGCGATGCGGAGCTTCTTCGGCCTGCCGATCGCCTCCCTGGACGTGACCGCGGGCGCCGTCGTCGCCTCGGTCGCGGTCGGTCTGCTGGCGACGACGGCGGGGGCGCTCTACCCCTCGCTGCGGGCGGGCCGCGTCGCCCCGGTGCTGGCGCTGACCGGCGCGCTGCGGACGGAGCGGCGGCCGGGCCGGCGGCGCGCCCTCCTCGGCCTCGCCCTCTTCCTCCCCGGGATGGCGATCGGCGGCCTCTTCTGGTTCAGCAACGCGAGCGGCACGACGACCGCCGCGGTGGTCGGCATCGGCTCGACCCTGACGATGTTCGTCGGCATGGTGCTGCTGGCGCCGTTCCTGGTGATGCCGCTGATCGACCTGCTCGCCCGGCCGGTGCGGGCGCTGATGCCCTCGGAGGGGCGGCTCGCGTCCGACTCGCTGCGGATGAACCCACTGCGCACCTCGGCCACCGCCGCCGCGCTCGTCGTCACCCTCTCCGTCGTGGTCGTGAACTCGACCATGAGCGCCAGCTTCCTCGGCACGATCTCCGCCGAGCTCGACGCCCACTTCGCCCGCGACCTGACCGTGCAGCCGCTCGGCTACAGCAGCTACGGGCCGCCGACGAGCGCCATCGCGCCGGCACTGCGCGGCGAGATCGCGAAGCTGCCCGCGGCCGGCACCGTCACCCCCGAGCGCATCGTCTACATGCGCCACCTGCCGGTCGGCGGCGAACCGGGGCTCCTCACCGCCGTCGACCCGCGCCGGTGGCCGCGCGTCGACCGCACCGAATACGAAGGCGCGACCACCGCCCGGGCGATGGCCGGCCTCGCCGCCGGCGGTGCCGTGCTGGGCAAGGGACTCGCCGACGACAACGGCCTCGCGGTCGGCGACACGGTCGTCCTGCGCGGCGCCGGCGGCGTCGTCCGCGCGCCGGTCGTGGCGACCGTCGACACGCTCGAAGGCAGCGGCAACCTGGTGACGGTCTCGCTGGCGACGATGAAGCGGGCCTACGGCATCGGCTCGGACTCGATCCTCGCCGTCACCGCCGCCTCGCCCGGCCTGCGCCCGGCGCTCGACCGCCAGGTCGCCGCGCTCCTCGAACGCCGTTATCCGGGCTTCGAAGCCGTCTCCAACGCCCAGGTCAAGCAGCAGTACGAAGACGCCGTGAACCAGCAGTTCTCCTTCTTCAACGCGATCGTCGGCATCGCCGTGATCGTCGGCCTCCTCGGCATCGTCAACACCCTCTCGATGGCGGTCCTGGAGCGCACCCGTGAGATCGGCGTCCTCCGCGCCCTCGGCGGCTCCCGCTGGCGCATCCGCCGCACGATGCTCGCCGAGAGCCTCCTCATCTCGATCGCCGGCAGCCTGGTCGGCATCGCCCTCGGCCTCCTGGTCGGCGTCGTCTGGATCCTCTCGATCCGCGAAAGCACCCTCCTCGGCCTCAACCTGGAGATCCCGACCGGCATCCTCGCCACCATCGCCGCCCTCGGCATCCTGATCGGCGTCCTCGCCGCCATCATCCCCGCCCGCCGCGCCGCCCACCTGGACCCGCTGAAGGCCCTCACGTACGAGTGA
PROTEIN sequence
Length: 833
MAGIVLGVGMAFGVLVLVATIHSSFDRLFDAIYGNTSVVVTGRSAVGQVPQRTLTEVREVDGVDAAVGRVMGIFRVIGDEGKAQSGSSSTLFVAGQNLRGPDPSGSEIVAGRKARGPGQIQLEQSWANAHGLAPGDRIRLATPSGRASLLVAGVFRFNSSLDLGGYGMAAAPLGSVRRMTGKPTGWDEVSVIAAGGVADEALARRIRAAVGPGVEVDTLAAKGEEVNEAMASLDIVLYFFSGMAIFVSAFLILNSFNMTVLQRIRELGTLRALGGSRRRIAGSVLGEALALAIPGCALGLLLGLGLAELLAAAMRSFFGLPIASLDVTAGAVVASVAVGLLATTAGALYPSLRAGRVAPVLALTGALRTERRPGRRRALLGLALFLPGMAIGGLFWFSNASGTTTAAVVGIGSTLTMFVGMVLLAPFLVMPLIDLLARPVRALMPSEGRLASDSLRMNPLRTSATAAALVVTLSVVVVNSTMSASFLGTISAELDAHFARDLTVQPLGYSSYGPPTSAIAPALRGEIAKLPAAGTVTPERIVYMRHLPVGGEPGLLTAVDPRRWPRVDRTEYEGATTARAMAGLAAGGAVLGKGLADDNGLAVGDTVVLRGAGGVVRAPVVATVDTLEGSGNLVTVSLATMKRAYGIGSDSILAVTAASPGLRPALDRQVAALLERRYPGFEAVSNAQVKQQYEDAVNQQFSFFNAIVGIAVIVGLLGIVNTLSMAVLERTREIGVLRALGGSRWRIRRTMLAESLLISIAGSLVGIALGLLVGVVWILSIRESTLLGLNLEIPTGILATIAALGILIGVLAAIIPARRAAHLDPLKALTYE*