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scnpilot_solids2_trim150_scaffold_366_curated_1

Organism: solids_Actinobacteria_3

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 ASCG 9 / 38
Location: comp(395..1462)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Streptomyces canus RepID=UPI0003788395 similarity UNIREF
DB: UNIREF100
  • Identity: 61.5
  • Coverage: 348.0
  • Bit_score: 411
  • Evalue 8.50e-112
ABC transporter; K10440 ribose transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 42.7
  • Coverage: 347.0
  • Bit_score: 277
  • Evalue 7.90e-72
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEH10656.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.7
  • Coverage: 347.0
  • Bit_score: 277
  • Evalue 3.50e-71

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Taxonomy

Frankia symbiont of Datisca glomerata → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1068
ATGACGCACACCGCACCGGAGCTCACCGCCGTTGCGCCAGAGGCGCAAACACAGCCGCCGGGCGCTCCATCCTCCCGGCCGAGCCGGCGCCCCCGGCTCAGCTTCTCCCTTCACACCGCCGAGCGCTTCGGGCTCGTCATCCTCTTCTTCGCGGTCGTCGCCGTGTTCTGCCTGCTGAAACCGGAAACTTTCGGCACCGCCGAGAACTTCCGCAGCATCGCCCTTTCCCAGTCGGTGCCGGCGGTCATCGCCCTGGCGCTGATCTTCCCCCTGGTCGGCGGCCGCTTCGACGTCTCGGTCGGCAACAACATGGGGCTCTGCGCGATCCTCGTGGCGGCACTGATGAGCAAAGCGAGCCTGCCGCTCGTGCCCTGCATCGCCGCGGCGATCGCCTGCGGCGCCCTGATCGGGGCGATCAACGGCGGCATCGTCACCTACCTGGGGGTCAACTCGATCATCGCCACGATCGGCACCGGCACGATCATGGCCGGGCTCGTCCAGGCCTACACCAACGGCATCCCGATCAGCAACGGGCTCTCGCCGACGCTGACCAACCTCAGCGCCAAGACCGTGGCCGGGATCCCGGCCCTCTTCCTGATCATGCTCGTCGTCAGCGTCGTCGTCTGGTTCGTCCTCACCCAGTCGCCCTACGGGCGACGTCTGCTCGCCACCGGCTCGAACCAGAGCGCCGCTCAGCTGACCGGTCTCAACGTGCGGCGCACGGTGCTGATGAGCTTCGTGCTCTCGGGTTGCCTCGCGGGCGCGGCCGGGGTCCTGCTGATCGCCTCCCAGGGCAGCGGCGACCCCAACGCCGGCAGCCTCGCCTCGATCCTCCCGGCGCTCGCGGCCGTCTTTCTCGGCGCCACCACCTGGCAGCCGGGCAAATACAACGTCCCGGGCACGATCGTCGGCCTCTTCTTCGTCGGCACGACGATCAGCGGCCTCGTCCTCCTCGGAGTCGCCCCCTGGGTGACCCAGGTCTTCAACAGTGTGGCAGTGGTCGTCGCGATCGCAATCTCCGCCCAACTGCGCCGGAGGCGCACCGGAACCCTCGAGATCGGGACCTGA
PROTEIN sequence
Length: 356
MTHTAPELTAVAPEAQTQPPGAPSSRPSRRPRLSFSLHTAERFGLVILFFAVVAVFCLLKPETFGTAENFRSIALSQSVPAVIALALIFPLVGGRFDVSVGNNMGLCAILVAALMSKASLPLVPCIAAAIACGALIGAINGGIVTYLGVNSIIATIGTGTIMAGLVQAYTNGIPISNGLSPTLTNLSAKTVAGIPALFLIMLVVSVVVWFVLTQSPYGRRLLATGSNQSAAQLTGLNVRRTVLMSFVLSGCLAGAAGVLLIASQGSGDPNAGSLASILPALAAVFLGATTWQPGKYNVPGTIVGLFFVGTTISGLVLLGVAPWVTQVFNSVAVVVAIAISAQLRRRRTGTLEIGT*