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scnpilot_solids2_trim150_scaffold_290_curated_19

Organism: solids_Alphaproteobacteria_1

near complete RP 50 / 55 BSCG 49 / 51 MC: 3 ASCG 11 / 38
Location: comp(20010..20747)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.3
  • Coverage: 245.0
  • Bit_score: 321
  • Evalue 1.10e-84
truA; tRNA pseudouridine synthase A (EC:5.4.99.12); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] similarity KEGG
DB: KEGG
  • Identity: 64.9
  • Coverage: 245.0
  • Bit_score: 319
  • Evalue 1.20e-84
tRNA pseudouridine synthase A n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SD75_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 65.3
  • Coverage: 245.0
  • Bit_score: 321
  • Evalue 8.00e-85

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Taxonomy

Hyphomicrobium nitrativorans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 738
ATGCCGCGCTACCGCCTGACGCTCGAATATGATGGCGCGCCCTTTGTCGGCTTCCAGCGTCAGAACAATGGCCCCTCGGTGCAGGGTGCGCTGGAAGACGCGATCGAAAAACTCTCGGCCCAGCGTGTCACCGTGATGGCGGCCGGCCGCACCGATGCCGGTGTCCATGCGCTGGCGCAGGTGGTGCATTTCGATCTGGAAAAGACCTATGTGGCCGAAAAGGTGCGCGATGCGCTGAACTTTCACCTGCGGCCCAATCCGGTGTCGGTGCTGGATGCGGTGGTTGCGGCGCCCGATTTCCACGCCCGTTTTCAGGCCAGGGGCCGCCATTATCTCTACCGCATTCTCTGCCGCACCGCGCCGCCCGCCATCGACCGTGGCCGGGTCTGGCATGTCATGCACAATCTCGATTGGCAGGCGATGCACCGCGCGGCACAGGTGCTCGTCGGCCATCATGATTTCACCACCTTCCGCGCCACCAATTGCCAGGCCAAATCGCCGATGAAGACGCTGGATCGTCTGGCGGTTGAACCGGCGGGTGCGGAGATCCATATCTATGCCGATGCGCGCAGCTTCCTGCATCATCAGGTGCGCTCGATGGTGGGGTCGCTGAAACTGGTGGGGGAGGGCAAGTGGGACGAAGCCCGCCTTGCTGCCGTGCTGGCGGCGCGGGATCGCACCGCCTGCGGTCCGGTGGCACCGGCCGAAGGGCTCTATCTCACCGCTGTCGATTACTGA
PROTEIN sequence
Length: 246
MPRYRLTLEYDGAPFVGFQRQNNGPSVQGALEDAIEKLSAQRVTVMAAGRTDAGVHALAQVVHFDLEKTYVAEKVRDALNFHLRPNPVSVLDAVVAAPDFHARFQARGRHYLYRILCRTAPPAIDRGRVWHVMHNLDWQAMHRAAQVLVGHHDFTTFRATNCQAKSPMKTLDRLAVEPAGAEIHIYADARSFLHHQVRSMVGSLKLVGEGKWDEARLAAVLAARDRTACGPVAPAEGLYLTAVDY*