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scnpilot_solids2_trim150_scaffold_657_curated_2

Organism: solids_Alphaproteobacteria_1

near complete RP 50 / 55 BSCG 49 / 51 MC: 3 ASCG 11 / 38
Location: 1105..1671

Top 3 Functional Annotations

Value Algorithm Source
Putative cold shock protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZG38_AZOL4 similarity UNIREF
DB: UNIREF100
  • Identity: 46.8
  • Coverage: 188.0
  • Bit_score: 160
  • Evalue 2.40e-36
Putative cold shock protein; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 46.8
  • Coverage: 188.0
  • Bit_score: 160
  • Evalue 7.40e-37
Putative cold shock protein {ECO:0000313|EMBL:CBS90714.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.8
  • Coverage: 188.0
  • Bit_score: 160
  • Evalue 3.30e-36

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Taxonomy

Azospirillum lipoferum → Azospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
ATGGCGAACTTTGAACACAGTGGATCCCGCCCTCTTGCAATGGCGTCGGCAAAGGGCACGGTCAAATGGTTTAACGCGACCAAGGGCTATGGCTTCATCACCCTGGACAATGGCAGCGATGCGTTCTGTCACGCGTCGGCACTGGCGGCACTGGGCCAACAGAACCTGCCGCAAGGCTCTACGATTGTTTGCGACCTGCAGGAATCTCCGCGCGGGCTTCAGGTTGTTGCAGTGCATAGCGTCGACACCTCCACAGCCGATCCGGCAGCTGGCCGGTTTGGTGGCGGGGGCGGCGGCGGCGGTGGCGGCGACTTCGGTGCCAGACGGCCAAGGCCGCCGCGCGATGCCGGGCCCAGCGGGCCGATGGTTGAAGGAACGGTCAAATTCTTCAACGAACAAAAAGGCTTCGGCTTTGTCATGCCGCAGGACGGCAGCGGCGATGTCTATATTCACGCCAGTGCCCTGCGCCGCTCAGGCATCCCGGTGCTGAGCCCGGAACAGCGCATCCGCTATTCCACCCGGCAGGGCATGAAGGGCGTGGAAGTGGACCGGATCGAGCTGACCTAG
PROTEIN sequence
Length: 189
MANFEHSGSRPLAMASAKGTVKWFNATKGYGFITLDNGSDAFCHASALAALGQQNLPQGSTIVCDLQESPRGLQVVAVHSVDTSTADPAAGRFGGGGGGGGGGDFGARRPRPPRDAGPSGPMVEGTVKFFNEQKGFGFVMPQDGSGDVYIHASALRRSGIPVLSPEQRIRYSTRQGMKGVEVDRIELT*