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scnpilot_solids2_trim150_scaffold_228_curated_22

Organism: solids_Alphaproteobacteria_1

near complete RP 50 / 55 BSCG 49 / 51 MC: 3 ASCG 11 / 38
Location: comp(17226..18185)

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter MFP subunit n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8HYJ2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 43.3
  • Coverage: 312.0
  • Bit_score: 251
  • Evalue 1.00e-63
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 42.2
  • Coverage: 296.0
  • Bit_score: 235
  • Evalue 3.10e-59
Tax=BJP_08E140C01_Xanthomonadales_64_42 similarity UNIPROT
DB: UniProtKB
  • Identity: 44.5
  • Coverage: 310.0
  • Bit_score: 263
  • Evalue 4.70e-67

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Taxonomy

BJP_08E140C01_Xanthomonadales_64_42 → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 960
ATGACACTGGCAACACGTTTGCGCGGCTACCGCCGGCATATCTCGGGATTTCGCGCAATGGCCTGTACGCTTGCCGTTCTGGCCGTTGCCGCCTGCTCAGATGGGAGCAAGTCTGAGAAGAAGGAAGCCAAGGAGGTCCGCCAGCCTGGTATTGCAACCATTGCGCCCGCGGTTGCGAAAGCGGCTGGCATTACCATCGCCACGGCTGGGCCTGCTGATATGCGTGAGACGATCACGTTGTATGGCACTGTTAAACCCAATGCCGAGCGTGAGCAGAGTTTACGCGCGCGCTATCCCGGAACCGTACGTCTTGTCGCAAAGCGCGTTGGTGATTCAGTCTCGCGCGGGCAGACAGTGTTGACCGTCGAGTCGAGCGAGAGTCTGCAAACCTATCCTATCGTAGCGCCGATTTCCGGCATCGTCCTCGAACGCAATGCCAATCCTGGCGAGACAGTCAACAGCGACACCGTTCTAATGCGCGTCGCCGATCTCTCGTCCGTCTGGGTGGAGCTTGCAGTCTTCGCGCGCGATCTAGGTCATGTACGGGCCGGGATGCCGGTAAGGATTCTCGCAAGTGACGGCGATTTTACGGCCGATGCCACCATCACTTATGTCTCGCCCTCTGGCGACAATGGCAGCCAGAGTGTCGTCGCGCGTGCCGGCGTCGACAATTCAGACCATCGTTGGGTGCCGGGGCAGTTTGTCAGCGGTGAAGTTGCGGTCGACGAGTTTCGGGCGCCCGTGACGGTCGTCCCATCCGCCTTGCAAGCCATGAATGGCAAAGATGTTGTGTTCGTCCAGACACAACGAGGGTTCGCGCCGCGGGCTGTCGTGCTTGGCCGTCGCTCGCGCGTAGCTGTCGAAATCCTTCGCGGCCTTTCACCAGGCGAACGCTATGCAGCAGCCAACAGCTATCTGATCAAGGCCGAGTTGACCAAGGGCGAAGCGGAGGAGGACTAA
PROTEIN sequence
Length: 320
MTLATRLRGYRRHISGFRAMACTLAVLAVAACSDGSKSEKKEAKEVRQPGIATIAPAVAKAAGITIATAGPADMRETITLYGTVKPNAEREQSLRARYPGTVRLVAKRVGDSVSRGQTVLTVESSESLQTYPIVAPISGIVLERNANPGETVNSDTVLMRVADLSSVWVELAVFARDLGHVRAGMPVRILASDGDFTADATITYVSPSGDNGSQSVVARAGVDNSDHRWVPGQFVSGEVAVDEFRAPVTVVPSALQAMNGKDVVFVQTQRGFAPRAVVLGRRSRVAVEILRGLSPGERYAAANSYLIKAELTKGEAEED*