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scnpilot_solids2_trim150_scaffold_29690_curated_1

Organism: solids_Bacteroidetes_1

near complete RP 49 / 55 BSCG 46 / 51 ASCG 13 / 38 MC: 1
Location: comp(127..909)

Top 3 Functional Annotations

Value Algorithm Source
Tetracycline regulation of excision, RteC n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S6Q6_PEDSD similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 260.0
  • Bit_score: 522
  • Evalue 2.50e-145
Tetracycline regulation of excision, RteC similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 260.0
  • Bit_score: 522
  • Evalue 7.90e-146
Tetracycline regulation of excision, RteC {ECO:0000313|EMBL:ADY52166.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 260.0
  • Bit_score: 522
  • Evalue 3.50e-145

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Taxonomy

Pseudopedobacter saltans → Pseudopedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 783
CAAATGATGCAAACTGCGGATGAGGCTTACCAAATGACCTTATTCTTAAAGGAAATGCTGTTTACTATAAAGATGAAAGTCTTGCAGACCGGATTTAAGGACGAACGGCAGGAAATCAATTTTTTCAAGAAAATCAAACCGCAGATTTTAGGAAAACTTATTTATTACAATAAGGTATTCCGCATTGAAACTACCTGCCCCGTAAGTGCAGGGAGAATACACCAAAGTTATTTTGAAAACCAACTGAAAATTCTGAAATCCGAATACAAGGAAAGCATATCCAATGAGGATTTTTACAGGTACTATCGTGCAGGCAGAACTGACCGTGACCACAGTTATTTCAGGCTCGGAAAAATCAATTACCACGATGGTCTAAAAAGTAGTGTATTTGAAATTGACCTTAGCTTTTCTACTTATTACGATAACAAAGTTGCCCATATTATAGCCAATGAATTACTTTATACTTTCTTGCTTACCAAAATAAACCCTGAAAAAAATCCCGATACCATTTCAATAAACGGTGATGGAAACAAAGACATTTCGTGGACGAACTCGCAAAATGCACTGATAGAATTGATTTACGCCCTGTATGTTTCCAAATCTATTGCATACGGGAAAATAGGCATCAGGAAATTAGCATTGATTTTCCAAATCCTCTTCCGAACGCCCTTGAACGATATACATCATTCTTTCCACCGAATGAAAACAAGGGCAGGCTCCCGAACGGTGTTTTTAGACCAGCTCAAAATTTCCCTCGAAGAGTATATGGATAAAGACCTTTAG
PROTEIN sequence
Length: 261
QMMQTADEAYQMTLFLKEMLFTIKMKVLQTGFKDERQEINFFKKIKPQILGKLIYYNKVFRIETTCPVSAGRIHQSYFENQLKILKSEYKESISNEDFYRYYRAGRTDRDHSYFRLGKINYHDGLKSSVFEIDLSFSTYYDNKVAHIIANELLYTFLLTKINPEKNPDTISINGDGNKDISWTNSQNALIELIYALYVSKSIAYGKIGIRKLALIFQILFRTPLNDIHHSFHRMKTRAGSRTVFLDQLKISLEEYMDKDL*