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scnpilot_solids2_trim150_scaffold_139_curated_86

Organism: solids_Bacteroidetes_1

near complete RP 49 / 55 BSCG 46 / 51 ASCG 13 / 38 MC: 1
Location: comp(98164..98439)

Top 3 Functional Annotations

Value Algorithm Source
Histone family protein DNA-binding protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PK45_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 67.4
  • Coverage: 89.0
  • Bit_score: 121
  • Evalue 5.90e-25
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta similarity KEGG
DB: KEGG
  • Identity: 67.4
  • Coverage: 89.0
  • Bit_score: 121
  • Evalue 1.90e-25
Transcriptional regulator HU subunit alpha {ECO:0000313|EMBL:KGE87369.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.8
  • Coverage: 90.0
  • Bit_score: 121
  • Evalue 4.90e-25

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Taxonomy

Phaeodactylibacter xiamenensis → Phaeodactylibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 276
ATGAACAAAGGAGATTTAATCGACAAAATCGCGGCAGCAGCCGGAGTTACAAAAGCACAAGCTGGTGAAGCTTTAGATGCAGTATTATCAGGTATCGAAGGTTCTTTGAAAAAAGGCGACCGCGTTACTTTAGTTGGTTTCGGAACTTTCTCTACCAGCAAACGTGCTGCTCGTAAAGGCCGTAACCCACGCACTGGAAAAGAAATTAAAATCAAGGCTAAAACAGTTGTACGTTTCAAAGCCGGAAAACAACTAAGCGATAAAGTAAATAAATAA
PROTEIN sequence
Length: 92
MNKGDLIDKIAAAAGVTKAQAGEALDAVLSGIEGSLKKGDRVTLVGFGTFSTSKRAARKGRNPRTGKEIKIKAKTVVRFKAGKQLSDKVNK*